Homer de novo Motif Results (hs_BreastAdenocarcinoma_MCF7_cancer_CTCF_SRX160885_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 744
Total background sequences = 49404
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A A G T C G A T C C G A T A C T G A C G T A T C G T A G C A C G T A C G T A C G T A C G T A C T G 1e-13-3.027e+010.94%0.01%24.7bp (10.0bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.672)
More Information | Similar Motifs Found		motif file (matrix)
2 A C G T A T G C C G A T A T C G C A T G G A C T A G C T A C G T A C G T T C G A T C G A T A C G C G T A C A G T T G A C G C T A 1e-13-3.001e+011.61%0.06%21.2bp (24.2bp)Hand1::Tcf3/MA0092.1/Jaspar(0.634)
More Information | Similar Motifs Found		motif file (matrix)
3 C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T 1e-12-2.764e+010.81%0.01%23.2bp (21.9bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.575)
More Information | Similar Motifs Found		motif file (matrix)
4 * A G T C A T G C A C G T A G C T C G T A A G T C C G A T A C G T A C G T A C G T A G T C A G T C A G T C 1e-11-2.579e+010.67%0.00%19.1bp (0.0bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.634)
More Information | Similar Motifs Found		motif file (matrix)
5 * G T C A C T G A A G C T C T G A A G T C A C G T A C T G G T A C A C G T A G T C A C G T G T A C C G T A A C G T C T A G G T C A 1e-11-2.579e+010.67%0.00%20.9bp (0.0bp)PH0058.1_Hoxb3/Jaspar(0.591)
More Information | Similar Motifs Found		motif file (matrix)
6 * A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C 1e-10-2.517e+011.08%0.02%27.5bp (24.3bp)Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer(0.549)
More Information | Similar Motifs Found		motif file (matrix)
7 * C G A T G C A T G A T C G T A C A G T C T C G A C G A T C G T A C A T G G T A C G A C T T A G C A C G T A T C G G C T A A G C T 1e-10-2.439e+010.94%0.01%28.6bp (30.7bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.581)
More Information | Similar Motifs Found		motif file (matrix)
8 * C G A T A C T G A C T G T C G A G C T A G A C T A C G T A C G T A T G C A C G T A C T G C G A T G T C A T G C A C A G T C T G A 1e-10-2.439e+011.61%0.10%20.2bp (21.1bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.644)
More Information | Similar Motifs Found		motif file (matrix)
9 * C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C 1e-10-2.350e+010.81%0.01%31.4bp (31.1bp)Gfi1b/MA0483.1/Jaspar(0.787)
More Information | Similar Motifs Found		motif file (matrix)
10 * A C T G C T A G T C A G A T G C A G T C G A T C T A C G T G C A T A C G A C G T A T C G T A G C C A G T C T A G A C T G A T C G 1e-10-2.349e+012.28%0.27%32.8bp (26.1bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.556)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G C G A T A C T G G T A C C G T A A G C T G T A C C G A T A C G T A C G T A C T G A C G T A G T C G A C T T A C G A G T C 1e-10-2.347e+010.94%0.02%29.9bp (23.5bp)PB0146.1_Mafk_2/Jaspar(0.616)
More Information | Similar Motifs Found		motif file (matrix)
12 * G T C A A C G T A C G T A G T C C G A T C G T A A G C T A G T C A G T C A C G T C A G T A G T C C G T A 1e-10-2.328e+011.08%0.03%23.5bp (26.3bp)ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer(0.644)
More Information | Similar Motifs Found		motif file (matrix)
13 * G A C T A G T C G C T A C A T G C A G T T C G A G T C A C G A T C A T G A C T G G A C T G T A C G A C T T A C G C A G T C A T G 1e-10-2.319e+011.34%0.06%20.4bp (23.7bp)PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer(0.540)
More Information | Similar Motifs Found		motif file (matrix)
14 * A C T G A T C G A T C G A T G C A C G T G T A C A G T C G T A C G A T C A C G T A T C G C A T G T A C G 1e-10-2.314e+012.02%0.21%25.8bp (24.0bp)PB0052.1_Plagl1_1/Jaspar(0.751)
More Information | Similar Motifs Found		motif file (matrix)
15 * T C G A C T A G A C T G G A C T C G T A C T A G T A G C G C T A A T G C A C G T C T A G C T A G A C T G 1e-9-2.260e+012.42%0.33%21.3bp (26.1bp)PB0099.1_Zfp691_1/Jaspar(0.641)
More Information | Similar Motifs Found		motif file (matrix)
16 * A C T G C G T A A C G T T A G C A G C T A C T G A G T C T A G C G A C T C A G T A C G T A T C G C G A T 1e-9-2.214e+014.44%1.19%26.7bp (26.1bp)Sox2/MA0143.3/Jaspar(0.553)
More Information | Similar Motifs Found		motif file (matrix)
17 * T C G A G T C A A C G T A T G C C G A T T G C A G T C A G C A T G A C T A C G T 1e-9-2.195e+0112.50%6.26%24.3bp (27.5bp)PHOX2A/MA0713.1/Jaspar(0.759)
More Information | Similar Motifs Found		motif file (matrix)
18 * C T G A T A C G T G C A G T A C T G C A A T C G T C G A T C G A C G T A A T C G T A C G G T A C C G A T C A T G A T G C G C T A 1e-9-2.177e+012.15%0.27%21.4bp (26.1bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.514)
More Information | Similar Motifs Found		motif file (matrix)
19 * G T A C C T A G C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C T G 1e-9-2.163e+011.21%0.05%26.1bp (27.9bp)PH0134.1_Pbx1/Jaspar(0.624)
More Information | Similar Motifs Found		motif file (matrix)
20 * A C T G C T G A G T A C G A T C A C G T C G T A G T C A G T C A A T G C A G C T 1e-9-2.134e+012.15%0.27%19.2bp (28.7bp)PB0036.1_Irf6_1/Jaspar(0.627)
More Information | Similar Motifs Found		motif file (matrix)
21 * A G C T A G T C C G T A C G T A A G T C G T A C C G A T A C G T A C T G A C T G C G T A C G T A C G T A 1e-9-2.128e+010.94%0.02%19.7bp (22.1bp)NFAT5/MA0606.1/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
22 * C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T 1e-8-2.072e+012.69%0.47%24.3bp (27.0bp)PB0079.1_Sry_1/Jaspar(0.610)
More Information | Similar Motifs Found		motif file (matrix)
23 * C A G T A C T G A C T G A C T G A T G C A G T C A C T G A G T C C A T G C T A G 1e-8-2.043e+012.15%0.29%22.1bp (26.3bp)ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer(0.665)
More Information | Similar Motifs Found		motif file (matrix)
24 * A T G C A G T C A C G T A C G T C G T A A G T C A C G T A G T C C G T A A C T G A C G T A C T G C G T A 1e-8-1.998e+010.54%0.00%20.1bp (0.0bp)FOS::JUN/MA0099.2/Jaspar(0.616)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C T G G T A C A C G T C G T A A C G T A C G T T A G C A C G T A C G T A C T G A C G T A C G T A T C G 1e-8-1.998e+010.54%0.00%2.5bp (0.0bp)Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer(0.644)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C G T C A C T A G A C T G A C G T A C T G A C G T A G C T A C G T A C T G C G T A A C T G A C G T 1e-8-1.998e+010.54%0.00%30.6bp (0.0bp)TCF3/MA0522.2/Jaspar(0.688)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C T G A C G T C G T A A C T G A T C G C G A T T A C G A C T G A C T G C G T A C G T A A C T G A C T G 1e-8-1.998e+010.54%0.00%17.6bp (0.0bp)TBX20/MA0689.1/Jaspar(0.604)
More Information | Similar Motifs Found		motif file (matrix)
28 * A T G C G C A T T A G C C G A T A G T C A G T C G A T C A C T G A C T G C G T A C T A G C G T A C T G A C G T A A C T G A G C T 1e-8-1.998e+010.54%0.00%31.1bp (0.0bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.563)
More Information | Similar Motifs Found		motif file (matrix)
29 * C T G A C T G A C T A G T A G C G T A C C G T A C G A T A C G T C G T A C G T A C T A G C G T A A C T G C T A G C G T A C G T A 1e-8-1.870e+010.81%0.02%14.2bp (32.6bp)SPIB/MA0081.1/Jaspar(0.609)
More Information | Similar Motifs Found		motif file (matrix)
30 * A C T G T G C A G A C T A C T G A G T C G T C A A T G C A G T C G C A T A C T G A G T C A G C T A G C T 1e-7-1.683e+011.34%0.12%26.6bp (27.0bp)NHLH1/MA0048.2/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
31 * C T A G C T A G C G T A C T A G C G T A C G T A C G T A A C T G C A G T C T A G A G C T A C G T A C T G 1e-7-1.657e+010.94%0.05%29.6bp (24.2bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.619)
More Information | Similar Motifs Found		motif file (matrix)
32 * A C G T A G C T T C A G T A C G A G T C C T G A A C T G T C G A C G A T G T C A 1e-6-1.541e+011.08%0.08%25.9bp (22.3bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.709)
More Information | Similar Motifs Found		motif file (matrix)
33 * A G T C C G A T C G T A A C G T A C T G G A C T A G T C G C T A C T A G A G T C A G C T A G T C G A C T A C G T G T A C G T A C 1e-6-1.496e+010.94%0.06%22.1bp (28.2bp)PB0041.1_Mafb_1/Jaspar(0.578)
More Information | Similar Motifs Found		motif file (matrix)
34 * T A G C G T A C G C T A C T A G G A C T G A T C C A T G T A G C A T G C G A T C 1e-5-1.309e+011.48%0.23%22.9bp (27.3bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.673)
More Information | Similar Motifs Found		motif file (matrix)
35 * C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C T G 1e-5-1.287e+010.54%0.01%15.0bp (31.3bp)PH0068.1_Hoxc13/Jaspar(0.620)
More Information | Similar Motifs Found		motif file (matrix)
36 * C A G T A G T C A G C T A T G C G C T A A T C G A T G C A T C G A C T G C T A G 1e-4-1.048e+014.17%1.83%25.9bp (26.0bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.689)
More Information | Similar Motifs Found		motif file (matrix)
37 * C T A G G T A C A C T G T A G C A C T G A T G C A C T G G T A C A T C G A G T C A C T G A G T C A C T G 1e-2-6.621e+000.40%0.03%18.6bp (27.9bp)PB0095.1_Zfp161_1/Jaspar(0.801)
More Information | Similar Motifs Found		motif file (matrix)