Information for 4-TTAGTATGWT (Motif 22)

C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T
Reverse Opposite:
G C T A C G T A G A T C C G T A G A C T G T C A A T G C G A C T T C G A G T C A
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.676
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif233.5
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets51.5 +/- 24.3bp
Average Position of motif in Background52.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTATGWT----
NANTATTATAATTNNN
 A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTATGWT
BTVATTWGCATA--
 A C G T A C G T A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTATGWT---
CTACTAGGATGTNNTN
 A C G T A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTATGWT----
NNTAATTATAATNANN
 A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTATGWT----
NCGTATTATAATCNTA
 A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

POU3F3/MA0788.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTATGWT
AAATTAGCATAAT
 A C G T A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTATGWT
AATTTGCATANT
 A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

PB0064.1_Sox14_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTATGWT----
NNTAATTATAATTNNN
 A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTAGTATGWT---
CCATTGTATGCAAAT
 A C G T A C G T C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAGTATGWT
NTGGAATGTG
 C A G T A G C T C T G A T A C G C A G T C T G A A C G T C T A G G C A T C G A T
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G