Information for 2-KCACTSARYMCMTCTT (Motif 3)

C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G C G T A A C G T C T A G A C T G C T G A A G C T A C G T A T C G C G T A C T A G A C G T A C T G G T A C
p-value:1e-12
log p-value:-2.764e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 23.2bp
Average Position of motif in Background58.0 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KCACTSARYMCMTCTT
MRSCACTYAA--------
 A C G T A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--KCACTSARYMCMTCTT
AGCCACTCAAG-------
 A C G T A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--KCACTSARYMCMTCTT
AASCACTCAA--------
 A C G T A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--KCACTSARYMCMTCTT
AAGCACTTAA--------
 A C G T A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-KCACTSARYMCMTCTT
NSCACTYVAV-------
 A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:KCACTSARYMCMTCTT
GCACTTAA--------
 C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KCACTSARYMCMTCTT
ACCACTTAA--------
 A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KCACTSARYMCMTCTT
RSCACTYRAG-------
 A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KCACTSARYMCMTCTT
ACCACTTAA--------
 A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-KCACTSARYMCMTCTT
GATAATTAATCCCTCTT
 A C G T C A T G G T A C C G T A A G T C A C G T A T G C G T C A C T G A G A C T G T A C A G T C G T C A A C G T A G T C A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T