Homer de novo Motif Results (hs_lymphoblastoid_GM12873_normal_CTCF_SRX080349_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 844
Total background sequences = 47671
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G T A G C G T A C C G T A A T G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G T G A C C T A G T A G C G A C T 1e-581-1.338e+0351.66%1.24%18.6bp (29.1bp)CTCF/MA0139.1/Jaspar(0.976)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A 1e-18-4.292e+010.95%0.00%20.6bp (21.4bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.626)
More Information | Similar Motifs Found
motif file (matrix)
3 C T G A A C G T C G T A A C T G A T C G A C G T A C T G A C T G A G T C C G T A 1e-16-3.829e+012.96%0.29%18.7bp (31.9bp)Hic1/MA0739.1/Jaspar(0.765)
More Information | Similar Motifs Found
motif file (matrix)
4 T G C A C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G C T A G C T A G T C C G T A A C T G 1e-13-3.024e+011.42%0.05%26.0bp (21.9bp)PB0200.1_Zfp187_2/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
5 * C G T A A T G C C G T A C T G A A C G T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C 1e-11-2.559e+010.83%0.01%14.9bp (22.1bp)Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer(0.634)
More Information | Similar Motifs Found
motif file (matrix)
6 * T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T 1e-10-2.309e+014.86%1.48%26.5bp (29.3bp)PB0041.1_Mafb_1/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
7 * C T A G A G T C C A G T A T C G C G T A A T C G G C T A G T C A C T G A A G T C A G T C C A G T A T C G G T A C G T A C T C G A 1e-9-2.201e+010.95%0.03%32.8bp (19.9bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.549)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A G C T A C G T A G T C A G T C A G T C A G T C A C G T A G T C A G T C T A G C A C T G A C T G A G T C A C G T G T C A 1e-9-2.153e+010.59%0.01%26.7bp (12.0bp)MZF1(var.2)/MA0057.1/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
9 * T G A C G T C A G T C A A C G T A C G T A T G C C T G A G T C A C G T A C T G A 1e-8-2.062e+012.01%0.29%28.7bp (31.5bp)LIN54/MA0619.1/Jaspar(0.811)
More Information | Similar Motifs Found
motif file (matrix)
10 * T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T 1e-8-1.952e+010.59%0.01%15.4bp (26.1bp)Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.566)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A G C T C T G A A T G C C G T A A C T G A C T G G T C A C G T A A C T G 1e-7-1.745e+012.01%0.36%29.9bp (28.3bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.861)
More Information | Similar Motifs Found
motif file (matrix)