Information for 5-AGCAAAGTTT (Motif 6)

T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
Reverse Opposite:
C T G A C T G A C T G A G T A C A C G T A G C T A C G T A C T G A G T C A G C T
p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.700
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif706.6
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets48.0 +/- 26.5bp
Average Position of motif in Background51.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0041.1_Mafb_1/Jaspar

Match Rank:1
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------AGCAAAGTTT
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:2
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------AGCAAAGTTT
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGCAAAGTTT
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGCAAAGTTT
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAAGTTT
NACAGGAAAT---
 A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AGCAAAGTTT
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGTTT
AAGTCAGCANTTTTN
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGCAAAGTTT
TACCATAGCAACGGT-
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAAGTTT
GTCAGCANNTN--
 A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.57
Offset:-10
Orientation:forward strand
Alignment:----------AGCAAAGTTT---
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G T G A C C G T A C T G A T G C A C A T G G A C T G A C T G A C T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A