Information for 3-CCATGGAGCDGGTGCA (Motif 2)

A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
Reverse Opposite:
A C G T A C T G A G T C C G T A A T G C G T A C G A C T A T C G A G T C A C G T A T G C G T A C C G T A A G C T A C T G A C T G
p-value:1e-18
log p-value:-4.292e+01
Information Content per bp:1.811
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 20.6bp
Average Position of motif in Background46.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCATGGAGCDGGTGCA-
-----SDGCAGGTGCNS
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCATGGAGCDGGTGCA
--ATGCAACAGGTGG-
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCATGGAGCDGGTGCA
------AACAGGTGT-
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCATGGAGCDGGTGCA
------GACAGGTGTN
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCATGGAGCDGGTGCA
------NNCAGGTGNN
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCATGGAGCDGGTGCA
------NNCAGGTGCG
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCATGGAGCDGGTGCA
------NNCAGGTGTN
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCATGGAGCDGGTGCA---
--NNNNAGCAGCTGCTGAN
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A A C G T A C G T A C G T
A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCATGGAGCDGGTGCA-
--GAGCAACAGGTGGTT
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A A C G T
A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCATGGAGCDGGTGCA
------ACCACGTG--
 A G T C G T A C C T G A A C G T A C T G A T C G C G T A A C T G A T G C C G T A A C T G A T C G A C G T A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T