Information for 6-CTGGTAAGATGSCCCT (Motif 10)

T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T
Reverse Opposite:
G T C A A C T G A T C G A T C G A T C G A G T C C G T A C G A T A T G C A G C T A C G T G C T A G T A C G T A C C G T A A T C G
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.752
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 15.4bp
Average Position of motif in Background53.6 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGGTAAGATGSCCCT
---GWAAYHTGABMC-
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTGGTAAGATGSCCCT
----CAAGATGGCGGC
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGGTAAGATGSCCCT
CTGGCAGNCTGCCA--
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTGGTAAGATGSCCCT-----
-----NNNNTGACCCGGCGCG
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CTGGTAAGATGSCCCT--
--------AAGACCCYYN
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGGTAAGATGSCCCT-
AAGGCCAGATGGTCCGG
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CTGGTAAGATGSCCCT-
--------ATGCCCACC
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGGTAAGATGSCCCT
-GGTCANNGTGACCTN
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTGGTAAGATGSCCCT-----
----NNANTTGACCCCTNNNN
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CTGGTAAGATGSCCCT
---------TGACCT-
 T A G C C G A T A C T G A C T G C A G T C G T A C T G A A T C G G C T A C G A T A C T G A T G C A T G C A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T