Homer de novo Motif Results (hs_culturedNHLFcells_NHLF_undef_CTCF_SRX038664_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 878
Total background sequences = 48012
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G A C T C T A G C T A G G T A C A G T C C G T A T A G C G A C T C G T A C T A G C T A G C A T G C T A G A C T G G T A C T C A G 1e-530-1.221e+0347.15%1.24%22.3bp (28.0bp)CTCF/MA0139.1/Jaspar(0.957)
More Information | Similar Motifs Found
motif file (matrix)
2 T C A G G T A C C A G T T C A G A C T G C T G A A T C G A T C G C T A G G T A C A T C G A G T C G A C T 1e-37-8.540e+015.24%0.35%25.2bp (26.0bp)PB0052.1_Plagl1_1/Jaspar(0.679)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A C G T C T A G C T G A A T G C C G T A A C T G A C G T A C G T C G T A A G T C C G T A C G T A 1e-16-3.902e+011.03%0.01%18.7bp (29.8bp)Myb/MA0100.2/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
4 A T G C A C T G A T C G A T C G G C A T G A C T A G C T A T C G C A T G A G T C C G T A A C T G A C T G A T C G G T A C A T G C 1e-12-2.892e+010.80%0.01%28.9bp (8.9bp)PH0140.1_Pknox1/Jaspar(0.548)
More Information | Similar Motifs Found
motif file (matrix)
5 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A 1e-12-2.885e+017.97%2.98%26.6bp (30.1bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.806)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T G A T C C G T A C G T A A T G C C G T A T A C G C A G T A C G T A C G T 1e-10-2.492e+012.39%0.35%22.5bp (27.8bp)MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer(0.706)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C 1e-10-2.482e+010.57%0.00%23.6bp (0.0bp)PH0164.1_Six4/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A 1e-10-2.482e+010.57%0.00%28.7bp (1.7bp)HLTF/MA0109.1/Jaspar(0.562)
More Information | Similar Motifs Found
motif file (matrix)
9 * G T C A A G T C A C G T A C T G A G T C C G T A A C T G C A T G A C T G A T C G A C T G A G T C G T A C C G T A G T C A A C T G 1e-10-2.482e+010.57%0.00%22.1bp (0.0bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.618)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A 1e-9-2.176e+012.16%0.34%19.3bp (28.5bp)Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer(0.759)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T G C A G T C C G T A C G T A A C T G C T A G 1e-9-2.137e+010.57%0.00%28.8bp (0.0bp)PB0051.1_Osr2_1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C T G C G A T C G T A A C G T A G T C C G T A A G C T C G T A A T G C A C G T 1e-8-1.964e+011.03%0.06%25.0bp (25.1bp)PH0161.1_Six1/Jaspar(0.671)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A C G T A C T G C G T A C T G A C G T A C G A T C T A G G T A C G T A C G C T A G A C T A C G T 1e-8-1.936e+010.80%0.03%26.6bp (21.1bp)PB0169.1_Sox15_2/Jaspar(0.694)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C T G A C G T C G T A C G T A C T G A C G T A 1e-8-1.921e+010.46%0.00%9.9bp (0.0bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.624)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C A G C T C G T A C G T A A C T G C G T A C G T A A T C G C G T A C T G A C G T A A G T C A C G T 1e-8-1.921e+010.46%0.00%27.1bp (0.0bp)PB0148.1_Mtf1_2/Jaspar(0.570)
More Information | Similar Motifs Found
motif file (matrix)
16 * A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C 1e-7-1.819e+011.03%0.07%18.5bp (27.7bp)GMEB2/MA0862.1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
17 * C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T 1e-7-1.743e+011.03%0.07%22.4bp (26.6bp)POU2F2/MA0507.1/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A C G T A C T G 1e-6-1.484e+010.46%0.01%19.4bp (29.2bp)PB0030.1_Hnf4a_1/Jaspar(0.752)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G 1e-5-1.283e+010.46%0.01%28.0bp (15.2bp)Ahr::Arnt/MA0006.1/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)