Information for 6-AAATATTAAA (Motif 10)

C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A
Reverse Opposite:
A G C T C G A T C G A T C G T A C G T A A C G T C G T A A C G T A C G T C G A T
p-value:1e-9
log p-value:-2.176e+01
Information Content per bp:1.850
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif161.2
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets35.6 +/- 19.3bp
Average Position of motif in Background50.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AAATATTAAA
GGTTAAACATTAA-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.76
Offset:4
Orientation:forward strand
Alignment:AAATATTAAA
----ATTAAA
 C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAATATTAAA--
AAAGATCAAAGG
 C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A A C G T A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTAAA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTAAA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAATATTAAA----
AAATAAGAAAAAAC
 C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAATATTAAA
GTTAATNATTAA-
 A C G T A C G T A C G T C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAATATTAAA-----
AAAGATCAAAGGGTT
 C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

HNF1A/MA0046.2/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAATATTAAA-
AGTTAATGATTAACT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A A C G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAATATTAAA--
-NTAATTAATAT
 C G T A C G T A C G T A G C A T G T C A C G A T C G A T C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T