Information for 9-GGACGTGCAT (Motif 17)

C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G G T A C C G T A G T A C C A T G C G A T G A T C A G T C
p-value:1e-7
log p-value:-1.743e+01
Information Content per bp:1.751
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif36.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets44.2 +/- 22.4bp
Average Position of motif in Background49.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGACGTGCAT--
TTCATTTGCATAT
 A C G T C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGACGTGCAT--
--ATTTGCATAA
 C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGACGTGCAT--
--ATTTGCATAT
 C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGACGTGCAT
RTACGTGC--
 C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGACGTGCAT--
GGGATTGCATNN
 C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGACGTGCAT
GGACGTGC--
 C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGACGTGCAT
GHATATKCAT
 C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTGCAT
GGGTACGTGC--
 A C G T A C G T C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTGCAT----
TNTAATTTGCATACNA
 A C G T A C G T C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTGCAT----
TNTAATTTGCATACNA
 A C G T A C G T C T A G C T A G C G T A G T A C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A