Information for 8-AGTCAGTGACACC (Motif 7)

C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C G T A T G C C T G A A G T C A G C T A C T G C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 23.6bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGTCAGTGACACC-----
-ATAAATGACACCTATCA
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:AGTCAGTGACACC-
------TGACACCT
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AGTCAGTGACACC-
------TCACACCT
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AGTCAGTGACACC-
------TCACACCT
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTCAGTGACACC
RGTTAGTGCCCY-
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGTCAGTGACACC-
----KTTCACACCT
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTCAGTGACACC
-NTGATTGACAGN
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGTGACACC
AGGTCANTGACCTN
 A C G T C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTCAGTGACACC
-BTGABTGACAGS
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AGTCAGTGACACC-
------TCACACCT
 C G T A A C T G C G A T A G T C C T G A A C T G A G C T A T C G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T