Information for 8-CGACRTAAMC (Motif 16)

A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A G A C T A C T G A C G T A T G C T A C G
p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.818
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif32.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets39.6 +/- 18.5bp
Average Position of motif in Background42.1 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GMEB2/MA0862.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGACRTAAMC
TTACGTAA--
 A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGACRTAAMC-
--AAATAAACA
 A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C A C G T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXF2/MA0030.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGACRTAAMC---
CAAACGTAAACAAT
 A C G T A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C A C G T A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Crem/MA0609.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGACRTAAMC
TATGACGTAA--
 A C G T A C G T A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGACRTAAMC--
----GTAAACAA
 A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGACRTAAMC
GATGACGTCA--
 A C G T A C G T A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGACRTAAMC
TGACGTCA--
 A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C
A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGACRTAAMC
TATTACGTAACA
 A C G T A C G T A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGACRTAAMC--
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CGACRTAAMC----
----GTAAACAWBN
 A T G C A T C G C G T A A G T C C T A G C G A T C G T A C G T A G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A