Homer de novo Motif Results (hs_NT2138_NT2138_undef_ER_SRX371438_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 887
Total background sequences = 46987
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G A C G T A T G C C G T A A T G C T A C G A T C G G C A T T A C G G T C A T A G C G T A C A G C T 1e-90-2.090e+0213.08%0.93%17.2bp (31.5bp)ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer(0.950)
More Information | Similar Motifs Found
motif file (matrix)
2 G C A T A C T G G C T A G T A C G T A C A G T C T C G A C T A G C G T A A G T C 1e-29-6.804e+0111.95%3.22%24.2bp (33.0bp)RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer(0.810)
More Information | Similar Motifs Found
motif file (matrix)
3 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A 1e-16-3.817e+0111.39%4.47%23.7bp (31.3bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.633)
More Information | Similar Motifs Found
motif file (matrix)
4 C T A G A C T G A C G T A G T C C T G A T A C G C T A G A C G T A G T C G T C A A G T C A G T C A C G T 1e-16-3.699e+011.47%0.04%13.1bp (24.1bp)XBP1/MA0844.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
5 A C G T G T C A G T A C C T G A C T G A G T A C G A C T G T A C A G T C A G T C C G T A A C T G C T G A C T A G C A T G A C T G 1e-14-3.255e+011.01%0.01%22.3bp (13.3bp)Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer(0.758)
More Information | Similar Motifs Found
motif file (matrix)
6 T A C G A T G C C G A T A C T G G T C A A G T C A G T C A G C T A T G C C T G A A T C G A T C G C G T A 1e-13-3.199e+014.06%0.82%24.1bp (30.5bp)Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer(0.720)
More Information | Similar Motifs Found
motif file (matrix)
7 A G C T A C T G A G T C C T G A A C T G A G T C C G A T A C T G C T A G A T C G A T G C C G T A A C T G C G T A C T G A A G T C 1e-13-3.152e+010.79%0.01%23.5bp (0.0bp)NHLH1/MA0048.2/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
8 A T C G A C G T A G T C G T A C C G T A A T G C T C G A C T A G A T C G A G T C A G T C G T C A G T C A 1e-12-2.825e+011.92%0.17%30.3bp (36.0bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.683)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C 1e-11-2.718e+011.01%0.02%29.1bp (19.2bp)GFY(?)/Promoter/Homer(0.710)
More Information | Similar Motifs Found
motif file (matrix)
10 * A T G C A C T G G A C T A C T G A C T G C G A T A C T G A C T G C G T A A C T G A T C G A G T C G T A C 1e-11-2.641e+011.01%0.03%27.0bp (28.0bp)Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer(0.624)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A 1e-11-2.629e+010.68%0.00%15.8bp (11.0bp)Creb3l2/MA0608.1/Jaspar(0.576)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G A T T A C G C G T A A T C G A T C G A T G C A G T C A G T C C G T A A C T G A C T G A T C G A G T C 1e-11-2.544e+011.24%0.06%20.6bp (29.0bp)Zfx/MA0146.2/Jaspar(0.691)
More Information | Similar Motifs Found
motif file (matrix)
13 * T A C G A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C T G C G T A 1e-10-2.490e+015.52%1.81%25.3bp (32.6bp)MF0004.1_Nuclear_Receptor_class/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G A T C G A C G T A T G C G T C A A C G T A T C G C G T A A T C G A C G T A T G C C G T A A T G C A G T C C G T A A C T G 1e-10-2.466e+010.56%0.00%22.2bp (0.0bp)FOSL1/MA0477.1/Jaspar(0.755)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A A G T C A C T G A G T C A T C G A G T C A C G T A T C G G T C A A G T C G T C A A C G T A C T G C G T A C T G A T A C G 1e-10-2.466e+010.56%0.00%21.7bp (0.0bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.574)
More Information | Similar Motifs Found
motif file (matrix)
16 * C T A G A G T C G T A C A C T G A T G C A G T C A G T C A G T C C G A T A C T G A C T G A G T C A G C T 1e-10-2.387e+010.68%0.01%28.6bp (10.0bp)TFAP2A/MA0003.3/Jaspar(0.687)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G A T A C T G A T G C A C T G A T G C A G T C A G C T A C T G T G A C A C G T A G T C G T A C G A T C C T A G T A C G T A C G 1e-10-2.340e+013.16%0.69%22.0bp (29.4bp)NRF1/MA0506.1/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
18 * G A C T A G C T A C G T T A C G G T A C G A C T T C A G C T G A G C T A T A C G 1e-9-2.280e+014.40%1.31%26.9bp (29.1bp)NRL/MA0842.1/Jaspar(0.746)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T A C G T A T C G A C G T A C T G A G T C A G C T C G A T A C T G A C T G G T A C C A G T A T G C 1e-9-2.272e+010.90%0.03%21.1bp (30.7bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.622)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G A G T C C G A T A T G C A G T C A C T G A G T C T A C G A G T C A C G T A C T G A C T G A C G T 1e-8-1.976e+010.68%0.01%25.9bp (13.6bp)POL013.1_MED-1/Jaspar(0.648)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A G T C A G T C A G T C A C G T A C T G G A T C C T G A A C T G A G C T A C G T A C G T A C G T 1e-8-1.976e+010.68%0.01%23.6bp (4.8bp)PB0146.1_Mafk_2/Jaspar(0.687)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A 1e-7-1.808e+012.59%0.61%28.9bp (29.0bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.784)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T C T G A A C G T A C T G G T A C C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C T G A C T G A C T G A G T C 1e-5-1.372e+010.34%0.00%14.4bp (0.0bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.618)
More Information | Similar Motifs Found
motif file (matrix)
24 * G A C T A G C T T A C G T A C G T G A C A G C T A G C T T G A C C G A T T A G C 1e-4-1.096e+014.28%2.01%27.3bp (32.3bp)NFIC/MA0161.1/Jaspar(0.685)
More Information | Similar Motifs Found
motif file (matrix)