Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-89 | -2.062e+02 | 0.0000 | 137.0 | 15.45% | 716.1 | 1.52% | motif file (matrix) |
svg |
2 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-36 | -8.358e+01 | 0.0000 | 412.0 | 46.45% | 12470.4 | 26.53% | motif file (matrix) |
svg |
3 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-35 | -8.164e+01 | 0.0000 | 236.0 | 26.61% | 5318.2 | 11.32% | motif file (matrix) |
svg |
4 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-17 | -4.041e+01 | 0.0000 | 65.0 | 7.33% | 954.9 | 2.03% | motif file (matrix) |
svg |
5 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-17 | -4.028e+01 | 0.0000 | 230.0 | 25.93% | 6928.4 | 14.74% | motif file (matrix) |
svg |
6 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-16 | -3.809e+01 | 0.0000 | 87.0 | 9.81% | 1650.6 | 3.51% | motif file (matrix) |
svg |
7 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-14 | -3.424e+01 | 0.0000 | 43.0 | 4.85% | 509.7 | 1.08% | motif file (matrix) |
svg |
8 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-13 | -3.194e+01 | 0.0000 | 55.0 | 6.20% | 857.0 | 1.82% | motif file (matrix) |
svg |
9 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-13 | -3.171e+01 | 0.0000 | 53.0 | 5.98% | 807.0 | 1.72% | motif file (matrix) |
svg |
10 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-13 | -3.106e+01 | 0.0000 | 28.0 | 3.16% | 232.4 | 0.49% | motif file (matrix) |
svg |
11 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-12 | -2.915e+01 | 0.0000 | 46.0 | 5.19% | 671.5 | 1.43% | motif file (matrix) |
svg |
12 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-8 | -1.842e+01 | 0.0000 | 67.0 | 7.55% | 1660.4 | 3.53% | motif file (matrix) |
svg |
13 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-6 | -1.610e+01 | 0.0000 | 12.0 | 1.35% | 83.6 | 0.18% | motif file (matrix) |
svg |
14 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-6 | -1.563e+01 | 0.0000 | 21.0 | 2.37% | 279.3 | 0.59% | motif file (matrix) |
svg |
15 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.548e+01 | 0.0000 | 32.0 | 3.61% | 588.7 | 1.25% | motif file (matrix) |
svg |
16 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-6 | -1.544e+01 | 0.0000 | 14.0 | 1.58% | 125.8 | 0.27% | motif file (matrix) |
svg |
17 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-6 | -1.540e+01 | 0.0000 | 134.0 | 15.11% | 4547.8 | 9.68% | motif file (matrix) |
svg |
18 |
| GFY(?)/Promoter/Homer | 1e-6 | -1.479e+01 | 0.0000 | 14.0 | 1.58% | 132.9 | 0.28% | motif file (matrix) |
svg |
19 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-6 | -1.468e+01 | 0.0000 | 42.0 | 4.74% | 935.1 | 1.99% | motif file (matrix) |
svg |
20 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.454e+01 | 0.0000 | 9.0 | 1.01% | 48.9 | 0.10% | motif file (matrix) |
svg |
21 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.452e+01 | 0.0000 | 32.0 | 3.61% | 615.8 | 1.31% | motif file (matrix) |
svg |
22 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.405e+01 | 0.0000 | 12.0 | 1.35% | 101.7 | 0.22% | motif file (matrix) |
svg |
23 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-5 | -1.360e+01 | 0.0000 | 102.0 | 11.50% | 3323.3 | 7.07% | motif file (matrix) |
svg |
24 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.339e+01 | 0.0000 | 136.0 | 15.33% | 4810.3 | 10.24% | motif file (matrix) |
svg |
25 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.320e+01 | 0.0000 | 51.0 | 5.75% | 1315.4 | 2.80% | motif file (matrix) |
svg |
26 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-5 | -1.261e+01 | 0.0000 | 47.0 | 5.30% | 1196.5 | 2.55% | motif file (matrix) |
svg |
27 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.235e+01 | 0.0001 | 30.0 | 3.38% | 618.7 | 1.32% | motif file (matrix) |
svg |
28 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.210e+01 | 0.0001 | 29.0 | 3.27% | 594.8 | 1.27% | motif file (matrix) |
svg |
29 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-5 | -1.194e+01 | 0.0001 | 27.0 | 3.04% | 535.3 | 1.14% | motif file (matrix) |
svg |
30 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.135e+01 | 0.0001 | 214.0 | 24.13% | 8639.9 | 18.38% | motif file (matrix) |
svg |
31 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.109e+01 | 0.0002 | 165.0 | 18.60% | 6365.3 | 13.54% | motif file (matrix) |
svg |
32 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.106e+01 | 0.0002 | 166.0 | 18.71% | 6416.0 | 13.65% | motif file (matrix) |
svg |
33 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-4 | -1.073e+01 | 0.0002 | 63.0 | 7.10% | 1917.6 | 4.08% | motif file (matrix) |
svg |
34 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.039e+01 | 0.0003 | 103.0 | 11.61% | 3636.3 | 7.74% | motif file (matrix) |
svg |
35 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.029e+01 | 0.0004 | 18.0 | 2.03% | 308.0 | 0.66% | motif file (matrix) |
svg |
36 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -1.022e+01 | 0.0004 | 37.0 | 4.17% | 942.6 | 2.01% | motif file (matrix) |
svg |
37 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -9.969e+00 | 0.0005 | 51.0 | 5.75% | 1487.7 | 3.17% | motif file (matrix) |
svg |
38 |
| Sp1(Zf)/Promoter/Homer | 1e-4 | -9.875e+00 | 0.0005 | 34.0 | 3.83% | 849.3 | 1.81% | motif file (matrix) |
svg |
39 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-4 | -9.733e+00 | 0.0006 | 37.0 | 4.17% | 965.9 | 2.06% | motif file (matrix) |
svg |
40 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -9.516e+00 | 0.0007 | 32.0 | 3.61% | 793.0 | 1.69% | motif file (matrix) |
svg |
41 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -9.417e+00 | 0.0007 | 30.0 | 3.38% | 726.3 | 1.55% | motif file (matrix) |
svg |
42 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -9.414e+00 | 0.0007 | 34.0 | 3.83% | 870.5 | 1.85% | motif file (matrix) |
svg |
43 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-4 | -9.399e+00 | 0.0007 | 109.0 | 12.29% | 3999.5 | 8.51% | motif file (matrix) |
svg |
44 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -9.064e+00 | 0.0010 | 94.0 | 10.60% | 3366.5 | 7.16% | motif file (matrix) |
svg |
45 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | -8.734e+00 | 0.0013 | 28.0 | 3.16% | 684.6 | 1.46% | motif file (matrix) |
svg |
46 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -8.718e+00 | 0.0013 | 96.0 | 10.82% | 3489.8 | 7.43% | motif file (matrix) |
svg |
47 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.680e+00 | 0.0013 | 21.0 | 2.37% | 446.6 | 0.95% | motif file (matrix) |
svg |
48 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.645e+00 | 0.0013 | 124.0 | 13.98% | 4763.4 | 10.14% | motif file (matrix) |
svg |
49 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -8.637e+00 | 0.0013 | 29.0 | 3.27% | 724.3 | 1.54% | motif file (matrix) |
svg |
50 |
| ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.604e+00 | 0.0013 | 15.0 | 1.69% | 261.6 | 0.56% | motif file (matrix) |
svg |
51 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.510e+00 | 0.0014 | 41.0 | 4.62% | 1182.7 | 2.52% | motif file (matrix) |
svg |
52 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -8.251e+00 | 0.0018 | 31.0 | 3.49% | 815.3 | 1.73% | motif file (matrix) |
svg |
53 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-3 | -8.249e+00 | 0.0018 | 15.0 | 1.69% | 270.7 | 0.58% | motif file (matrix) |
svg |
54 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-3 | -8.166e+00 | 0.0019 | 33.0 | 3.72% | 894.4 | 1.90% | motif file (matrix) |
svg |
55 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-3 | -8.151e+00 | 0.0019 | 20.0 | 2.25% | 431.3 | 0.92% | motif file (matrix) |
svg |
56 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-3 | -8.083e+00 | 0.0020 | 7.0 | 0.79% | 66.4 | 0.14% | motif file (matrix) |
svg |
57 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.870e+00 | 0.0024 | 266.0 | 29.99% | 11726.4 | 24.95% | motif file (matrix) |
svg |
58 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-3 | -7.863e+00 | 0.0024 | 121.0 | 13.64% | 4720.6 | 10.04% | motif file (matrix) |
svg |
59 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -7.839e+00 | 0.0024 | 127.0 | 14.32% | 5001.0 | 10.64% | motif file (matrix) |
svg |
60 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.741e+00 | 0.0026 | 6.0 | 0.68% | 50.1 | 0.11% | motif file (matrix) |
svg |
61 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -7.638e+00 | 0.0029 | 23.0 | 2.59% | 553.6 | 1.18% | motif file (matrix) |
svg |
62 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.512e+00 | 0.0032 | 22.0 | 2.48% | 523.8 | 1.11% | motif file (matrix) |
svg |
63 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-3 | -7.482e+00 | 0.0033 | 12.0 | 1.35% | 201.3 | 0.43% | motif file (matrix) |
svg |
64 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-3 | -7.476e+00 | 0.0033 | 44.0 | 4.96% | 1367.9 | 2.91% | motif file (matrix) |
svg |
65 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.456e+00 | 0.0033 | 19.0 | 2.14% | 422.2 | 0.90% | motif file (matrix) |
svg |
66 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.246e+00 | 0.0039 | 16.0 | 1.80% | 330.8 | 0.70% | motif file (matrix) |
svg |
67 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-3 | -7.004e+00 | 0.0049 | 194.0 | 21.87% | 8326.2 | 17.72% | motif file (matrix) |
svg |
68 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-3 | -6.982e+00 | 0.0050 | 30.0 | 3.38% | 843.5 | 1.79% | motif file (matrix) |
svg |
69 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -6.965e+00 | 0.0050 | 43.0 | 4.85% | 1362.9 | 2.90% | motif file (matrix) |
svg |
70 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -6.836e+00 | 0.0056 | 45.0 | 5.07% | 1454.7 | 3.10% | motif file (matrix) |
svg |
71 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.576e+00 | 0.0071 | 33.0 | 3.72% | 984.4 | 2.09% | motif file (matrix) |
svg |
72 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.129e+00 | 0.0110 | 39.0 | 4.40% | 1258.2 | 2.68% | motif file (matrix) |
svg |
73 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -6.052e+00 | 0.0117 | 36.0 | 4.06% | 1140.6 | 2.43% | motif file (matrix) |
svg |
74 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -6.008e+00 | 0.0121 | 15.0 | 1.69% | 339.4 | 0.72% | motif file (matrix) |
svg |
75 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.971e+00 | 0.0124 | 69.0 | 7.78% | 2573.7 | 5.48% | motif file (matrix) |
svg |
76 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.910e+00 | 0.0130 | 74.0 | 8.34% | 2805.3 | 5.97% | motif file (matrix) |
svg |
77 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -5.782e+00 | 0.0146 | 11.0 | 1.24% | 215.9 | 0.46% | motif file (matrix) |
svg |
78 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.700e+00 | 0.0156 | 59.0 | 6.65% | 2156.8 | 4.59% | motif file (matrix) |
svg |
79 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.587e+00 | 0.0173 | 40.0 | 4.51% | 1342.9 | 2.86% | motif file (matrix) |
svg |
80 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.105e+00 | 0.0276 | 11.0 | 1.24% | 237.0 | 0.50% | motif file (matrix) |
svg |
81 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -4.978e+00 | 0.0310 | 43.0 | 4.85% | 1524.6 | 3.24% | motif file (matrix) |
svg |
82 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -4.930e+00 | 0.0321 | 12.0 | 1.35% | 276.4 | 0.59% | motif file (matrix) |
svg |
83 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -4.813e+00 | 0.0356 | 9.0 | 1.01% | 181.0 | 0.39% | motif file (matrix) |
svg |
84 |
| p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer | 1e-2 | -4.642e+00 | 0.0418 | 6.0 | 0.68% | 95.0 | 0.20% | motif file (matrix) |
svg |
85 |
| p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-2 | -4.615e+00 | 0.0419 | 9.0 | 1.01% | 186.4 | 0.40% | motif file (matrix) |
svg |
86 |
| p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-2 | -4.615e+00 | 0.0419 | 9.0 | 1.01% | 186.4 | 0.40% | motif file (matrix) |
svg |
87 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.606e+00 | 0.0419 | 41.0 | 4.62% | 1472.5 | 3.13% | motif file (matrix) |
svg |