Information for 5-AMGTGRCSCTYTSAGA (Motif 11)

C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A T C G G T C A T C A G C G T A A T C G A T C G A C T G A G T C A G T C C G T A A G T C C A T G A C G T
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.7 +/- 15.8bp
Average Position of motif in Background62.9 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Creb3l2/MA0608.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AMGTGRCSCTYTSAGA
ACACGTGGC---------
 A C G T A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AMGTGRCSCTYTSAGA
TCACGTGACC--------
 A C G T A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AMGTGRCSCTYTSAGA
GCCACGTGACC--------
 A C G T A C G T A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AMGTGRCSCTYTSAGA
CACGTGDC---------
 A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AMGTGRCSCTYTSAGA
TCACGTGACCGG------
 A C G T A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AMGTGRCSCTYTSAGA
NCACGTGACN--------
 A C G T A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AMGTGRCSCTYTSAGA
CACGTGNC---------
 A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AMGTGRCSCTYTSAGA
GTCATGTGACC--------
 A C G T A C G T A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AMGTGRCSCTYTSAGA
CACGTGGC---------
 A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AMGTGRCSCTYTSAGA
GGCACGTGNC---------
 A C G T A C G T A C G T C G T A G T A C A C T G A C G T A C T G C T A G A G T C T A G C A T G C A C G T A G C T A C G T A T G C T C G A A C T G C G T A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T