Information for 12-CCTGCGGGAA (Motif 22)

A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A
Reverse Opposite:
G C A T A C G T A G T C A G T C A T G C A C T G G A T C G T C A T C A G A C T G
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.830
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif287.3
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets51.3 +/- 28.9bp
Average Position of motif in Background47.7 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCTGCGGGAA
CWGGCGGGAA
 A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CCTGCGGGAA--
--GGCGGGAARN
 A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCTGCGGGAA--
-GGGCGGGAAGG
 A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTGCGGGAA---
-TGGCGGGAAAHB
 A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T A C G T A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CCTGCGGGAA--
--GGCGGGAAAH
 A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCTGCGGGAA-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCTGCGGGAA--
-GGGCGGGAAGG
 A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTGCGGGAA-
BTKGGCGGGAAA
 A C G T A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCTGCGGGAA-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTGCGGGAA
CTTCCNGGAA
 A G T C A G T C C A G T C T A G T G A C T A C G A C T G A C T G G T C A C G T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A