Homer de novo Motif Results (hs_MCF10A_nontumori_undef_RNAPII_SRX143301_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 866
Total background sequences = 47745
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A A G T C A G C T C T G A A T G C A C T G A C G T A G T C C G T A A G T C A G T C C G A T A T G C A G T C A C T G C T A G 1e-16-3.719e+010.92%0.00%24.5bp (0.0bp)Gabpa/MA0062.2/Jaspar(0.667)
More Information | Similar Motifs Found
motif file (matrix)
2 A T C G G T A C A C T G G T C A A C T G G T C A C G T A A C T G A C T G A T G C G T A C A G T C A G C T A C T G A G T C A G T C 1e-15-3.662e+010.81%0.00%20.9bp (19.2bp)E2F4/MA0470.1/Jaspar(0.558)
More Information | Similar Motifs Found
motif file (matrix)
3 G T C A A C G T G C T A A C G T A C T G T A C G T G A C A C T G T C A G G A T C 1e-14-3.307e+017.51%2.43%26.8bp (31.4bp)YY1(Zf)/Promoter/Homer(0.859)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C G T C T G A A C T G A T C G A C T G G T A C A C G T A T C G A G T C C G T A A C T G A G T C A G C T C G A T A G T C A G T C 1e-11-2.652e+010.69%0.01%24.3bp (25.8bp)PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer(0.608)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G C G T A A T C G C G T A C G T A C G T A C T A G A G T C A C T G A T G C C T A G A G T C A G C T 1e-10-2.527e+010.92%0.02%30.0bp (12.1bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.616)
More Information | Similar Motifs Found
motif file (matrix)
6 * C G T A C G T A C T G A A C T G A G T C A C T G C T A G C G T A C G T A A C T G A G T C G T C A A C T G 1e-10-2.486e+010.58%0.00%31.3bp (0.0bp)SPIC/MA0687.1/Jaspar(0.801)
More Information | Similar Motifs Found
motif file (matrix)
7 * A T G C A G T C A C G T A C T G G A T C C A G T A C T G A T G C A G T C G T C A C T G A A C T G A C T G A C T G A C G T A C T G 1e-10-2.486e+010.58%0.00%26.3bp (12.0bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.591)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A 1e-10-2.466e+012.66%0.44%30.7bp (27.4bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.666)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A C T G A C G T C G A T C G T A A C G T A G C T A C G T A T C G C T A G 1e-10-2.456e+011.39%0.08%30.6bp (25.0bp)MF0010.1_Homeobox_class/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
10 * T G C A T A G C G A T C G C A T T A C G G A T C C G T A C G T A C A G T T G A C 1e-10-2.430e+011.96%0.22%25.9bp (28.6bp)Ddit3::Cebpa/MA0019.1/Jaspar(0.638)
More Information | Similar Motifs Found
motif file (matrix)
11 * G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T 1e-10-2.323e+011.39%0.10%22.8bp (25.5bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.721)
More Information | Similar Motifs Found
motif file (matrix)
12 * C T G A C T G A A C T G A G T C C G T A A T C G A G T C C G T A A C G T A C T G A C T G A G T C G T A C 1e-10-2.320e+011.04%0.04%16.7bp (21.9bp)Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.664)
More Information | Similar Motifs Found
motif file (matrix)
13 * C A G T C G A T C T A G A C T G T A G C G A C T T A C G A T G C C T A G C T A G 1e-9-2.291e+016.35%2.37%27.3bp (28.8bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
14 * C T A G A C T G A C T G C T G A C G T A C G T A C T G A A G T C C G T A A G T C 1e-9-2.252e+011.50%0.13%28.5bp (30.5bp)PB0141.1_Isgf3g_2/Jaspar(0.694)
More Information | Similar Motifs Found
motif file (matrix)
15 * C T A G A C T G C T A G A C T G A G T C A T C G A C G T C T A G A C T G A G T C A T G C G T C A A T G C A T C G A T G C A G T C 1e-8-2.071e+011.85%0.25%22.3bp (26.8bp)KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer(0.767)
More Information | Similar Motifs Found
motif file (matrix)
16 * C A T G G C A T C G T A C T A G T C A G A C G T G A C T A C T G C T A G A G C T 1e-8-2.056e+012.42%0.46%29.3bp (29.0bp)PB0029.1_Hic1_1/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C 1e-8-1.924e+011.15%0.08%16.5bp (26.0bp)HIC2/MA0738.1/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
18 * T C G A A C G T A C G T A G T C A C G T A G T C C T G A A T C G A C T G C G T A A C T G C G T A C G T A 1e-8-1.923e+010.46%0.00%15.9bp (0.0bp)GFX(?)/Promoter/Homer(0.756)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G 1e-8-1.923e+010.46%0.00%16.0bp (0.0bp)HINFP/MA0131.2/Jaspar(0.592)
More Information | Similar Motifs Found
motif file (matrix)
20 * C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T G A C G T A A C T G C T A G T C G A C T G A 1e-5-1.240e+015.08%2.39%23.8bp (25.3bp)EWSR1-FLI1/MA0149.1/Jaspar(0.670)
More Information | Similar Motifs Found
motif file (matrix)
21 * G T A C C G T A A C G T C G T A A C T G A C T G A C T G A G T C C G T A A G T C 1e-3-9.059e+000.35%0.01%30.4bp (16.3bp)PB0133.1_Hic1_2/Jaspar(0.771)
More Information | Similar Motifs Found
motif file (matrix)