Information for 10-GACCAATGCC (Motif 17)

A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C C T G A A G C T C G A T A C T G A C T G A C G T A G T C
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.853
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets39.0 +/- 16.5bp
Average Position of motif in Background52.3 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GACCAATGCC----
-----ATGCCCACC
 A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCAATGCC---
TGACCTTTGCCCTA
 A C G T A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACCAATGCC
AACATATGTC
 A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACCAATGCC--
CCGCCCAAGGGCAG
 A C G T A C G T A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GACCAATGCC----
-----ATGCCAACC
 A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GACCAATGCC---
TGACCTTTGCCCCA
 A C G T A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GACCAATGCC
AGCCAATCGG
 A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GACCAATGCC
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GACCAATGCC
ACCGTGACTAATTNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GACCAATGCC-
CGGCACGTGCCA
 A C G T A C T G C G T A A G T C T G A C C G T A T C G A G A C T A C T G A G T C G T A C A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A