Information for 6-CTCCCAGACT (Motif 11)

G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.323e+01
Information Content per bp:1.918
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif45.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets44.6 +/- 22.8bp
Average Position of motif in Background50.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CTCCCAGACT-
---CCAGACAG
 G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CTCCCAGACT---
---CCAGACRSVB
 G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTCCCAGACT
ATGCCAGACN
 G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTCCCAGACT-
---BCAGACWA
 G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGACT-----
CAAATCCAGACATCACA
 A C G T A C G T G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGACT---
ATTTCCCAGVAKSCY
 A C G T A C G T G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T A C G T A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCCCAGACT
TGCCCAGNHW
 G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCCCAGACT------
-TCCCAGMCRAGCCCC
 G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGACT
AGGTGHCAGACA
 A C G T A C G T G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGACT
HTTTCCCASG--
 A C G T A C G T G T A C C G A T G T A C A G T C A G T C C G T A A C T G C G T A G T A C A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T