Information for 3-GGCTCTCCAA (Motif 8)

A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
Reverse Opposite:
A G C T A C G T C A T G C T A G C G T A A C T G C G T A T C A G A T G C A G T C
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.838
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif210.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets61.1 +/- 30.7bp
Average Position of motif in Background52.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGCTCTCCAA
NSCACTYVAV
 A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCTCTCCAA
RSCACTYRAG
 A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGCTCTCCAA
AASCACTCAA-
 A C G T A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCTCTCCAA
AGCCACTCAAG
 A C G T A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCTCTCCAA--
AGGTCTCTAACC
 A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCTCCAA
NGCTN-----
 A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCTCTCCAA
GGGGATTTCC--
 A C G T A C G T A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGCTCTCCAA-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCTCCAA
NRRGGGTCTT---
 A C G T A C G T A C G T A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCTCTCCAA
---TCCCCA-
 A C T G A T C G A G T C C G A T A G T C C G A T A G T C G T A C T G C A T C G A
A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T