Information for 7-GCTGCGGACGCCRCTG (Motif 19)

A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G C T A T G C A G T C A T C G A T G C C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 16.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTGCGGACGCCRCTG
-NCGCGGACGTTG---
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTGCGGACGCCRCTG
----AGCGCGCC----
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCTGCGGACGCCRCTG--
--------CGCAGCTGCG
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCTGCGGACGCCRCTG-
-TTGGGGGCGCCCCTAG
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCTGCGGACGCCRCTG-
TTNGGGTACGCCNNANN
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCGGACGCCRCTG
NGCTN------------
 A C G T A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCTGCGGACGCCRCTG
GCTCCG----------
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCGGACGCCRCTG
NNTTTGCACACGGCCC--
 A C G T A C G T A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCTGCGGACGCCRCTG-
--ANCGCGCGCCCTTNN
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G A C G T
A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:GCTGCGGACGCCRCTG-------
------AATCGCACTGCATTCCG
 A C T G A G T C A C G T A T C G A T G C A C T G A T C G C T G A A G T C A C T G A G T C A G T C C T A G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G