Homer de novo Motif Results (hs_LungCarcinoma_A549_cancer_SMAD3_SRX366175_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 832
Total background sequences = 45874
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T A C G G T C A C T G A T C A G A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A C T 1e-104-2.409e+0218.03%1.61%26.4bp (34.0bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.986)
More Information | Similar Motifs Found
motif file (matrix)
2 A C T G A G T C C G T A C T A G C G T A G T A C T G C A A G C T A C G T G T A C C G A T A T C G A T G C 1e-15-3.675e+011.44%0.03%25.1bp (16.7bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.626)
More Information | Similar Motifs Found
motif file (matrix)
3 G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A 1e-15-3.589e+017.57%2.26%30.1bp (31.5bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.807)
More Information | Similar Motifs Found
motif file (matrix)
4 C A T G A G C T G T C A C T G A C G T A A G T C C G T A C T A G A C G T A C T G 1e-14-3.297e+013.00%0.37%30.7bp (28.6bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.845)
More Information | Similar Motifs Found
motif file (matrix)
5 A C T G A C T G G A T C C G T A C G T A A C T G A C T G C G T A A C T G A T C G A G T C A G T C C G T A 1e-13-3.067e+010.72%0.00%23.2bp (8.0bp)RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer(0.591)
More Information | Similar Motifs Found
motif file (matrix)
6 A C G T A C G T A G C T T A G C A C G T A T C G C G A T A G T C G C T A A G T C A G C T A C T G A C T G G A T C A G T C A G C T 1e-13-3.067e+010.72%0.00%17.2bp (25.7bp)Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer(0.637)
More Information | Similar Motifs Found
motif file (matrix)
7 A G T C G T A C A T G C G A C T G T A C A G T C G T A C G A C T A T G C C T A G 1e-12-2.822e+014.57%1.10%28.9bp (27.4bp)SP1/MA0079.3/Jaspar(0.736)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C C G T A A T G C C T G A A G T C C G A T A T G C A T G C A G T C C G T A 1e-11-2.666e+0112.02%5.68%26.0bp (33.9bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.711)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T 1e-10-2.487e+010.60%0.00%28.0bp (0.0bp)PB0122.1_Foxk1_2/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C T A C G C G T A T A C G G T C A A G T C C G A T T A C G A G T C C G T A 1e-10-2.426e+014.69%1.32%28.4bp (32.8bp)PB0091.1_Zbtb3_1/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A T C G A G C T A G C T A G C T A C T G C T G A C T A G A C T G C G T A A G T C C G T A A C T G 1e-9-2.108e+010.72%0.01%14.7bp (21.9bp)INSM1/MA0155.1/Jaspar(0.645)
More Information | Similar Motifs Found
motif file (matrix)
12 * G T C A C G A T A T C G C T A G A G T C C G T A T C G A C G A T A C T G G T C A G T C A A C T G A T C G T C G A G T C A A C G T 1e-8-2.001e+010.84%0.03%22.6bp (31.1bp)POL008.1_DCE_S_I/Jaspar(0.558)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T A C T G G T C A C G T A A C G T G C A T G T A C A G T C C G T A A T C G 1e-8-1.960e+011.92%0.28%22.1bp (31.5bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.790)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A 1e-8-1.924e+010.48%0.00%4.3bp (0.0bp)Hand1::Tcf3/MA0092.1/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C T G C T A G A G T C A G T C A G T C A C G T A G T C A G T C A G T C A G T C A C T G A G T C G T C A G T A C G T C A 1e-8-1.924e+010.48%0.00%27.0bp (0.0bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.698)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C T G A C T G C G T A C T G A A C G T A C T G A C G T A C G T C G T A C G T A 1e-7-1.706e+010.84%0.04%25.0bp (25.0bp)TEAD3/MA0808.1/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G C G T A A G T C A C T G A C T G A C G T A C G T A C T G A G T C C G T A 1e-7-1.648e+010.48%0.01%18.4bp (18.0bp)MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer(0.695)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A C T G C G T A 1e-7-1.631e+010.84%0.04%24.8bp (29.8bp)TBX15/MA0803.1/Jaspar(0.757)
More Information | Similar Motifs Found
motif file (matrix)
19 * C T G A C T A G A C T G C G T A C T A G A C T G A T G C C G T A A C G T A C G T 1e-6-1.485e+011.20%0.14%15.6bp (26.3bp)PH0125.1_Obox5_2/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C T G C G T A C G T A 1e-5-1.215e+010.48%0.01%19.7bp (28.1bp)Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer(0.647)
More Information | Similar Motifs Found
motif file (matrix)