Homer de novo Motif Results (hs_EpithelialCellLineDe_A549_Cancer_INO80_SRX1995829_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 628
Total background sequences = 48059
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A G T C A T G A G C T T A C G C T G A A C T G A C T G A G C T A G T C C G T A A T G C A G C T A G C T C G A T A G T C A G T C 1e-14-3.247e+010.96%0.00%21.3bp (21.1bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.732)
More Information | Similar Motifs Found		motif file (matrix)
2 C A T G G T A C C G T A A T C G A G T C C G T A C T G A A C T G A C T G C G T A A C T G C G T A T A C G A T G C C G T A A C T G 1e-14-3.247e+010.96%0.00%22.2bp (0.0bp)SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer(0.562)
More Information | Similar Motifs Found		motif file (matrix)
3 C G A T C G T A A C T G A G C T C G T A G T A C G T C A A G T C C A T G A C T G C T A G G T C A A C G T C T A G A C T G C G T A 1e-14-3.247e+010.96%0.00%28.2bp (0.0bp)MLXIPL/MA0664.1/Jaspar(0.571)
More Information | Similar Motifs Found		motif file (matrix)
4 C T G A A G T C C T G A A G T C C G A T A T C G A G C T A G C T A G T C C G A T C G T A G T A C G C T A A C G T C G A T G A T C 1e-13-3.104e+011.43%0.02%21.2bp (33.8bp)POL009.1_DCE_S_II/Jaspar(0.546)
More Information | Similar Motifs Found		motif file (matrix)
5 A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T 1e-12-2.907e+011.11%0.01%18.6bp (18.1bp)PB0180.1_Sp4_2/Jaspar(0.605)
More Information | Similar Motifs Found		motif file (matrix)
6 G T A C A G T C C T G A A T G C A G T C A T G C A T C G C T G A A C T G C T A G G T C A A G T C G T A C A C T G A C T G A C T G 1e-12-2.907e+011.11%0.01%27.3bp (20.4bp)PB0189.1_Tcfap2a_2/Jaspar(0.608)
More Information | Similar Motifs Found		motif file (matrix)
7 A G C T T C G A A G C T A C T G A C G T C G T A C T A G A C G T A C T G A G C T C G T A A G C T C T A G A C G T C T A G C G A T 1e-12-2.859e+011.27%0.02%22.7bp (21.1bp)PB0091.1_Zbtb3_1/Jaspar(0.537)
More Information | Similar Motifs Found		motif file (matrix)
8 * G T C A C G A T A C T G A G T C G T C A C T A G C G A T C T A G A G C T A T C G A G T C G C A T A T C G A T C G C G T A C T G A 1e-11-2.683e+011.27%0.02%21.0bp (24.0bp)PB0091.1_Zbtb3_1/Jaspar(0.685)
More Information | Similar Motifs Found		motif file (matrix)
9 * A C T G A C G T A C T G A G T C A G T C A C G T A G T C A C G T A G T C A C G T C G A T G T C A A G T C 1e-11-2.636e+010.80%0.00%8.6bp (0.0bp)PB0114.1_Egr1_2/Jaspar(0.520)
More Information | Similar Motifs Found		motif file (matrix)
10 * G C T A C G A T A C T G C G T A C T A G A C T G A G T C A G T C A G C T A G T C C G A T A C G T A T G C C G T A A G C T A G T C 1e-11-2.636e+010.80%0.00%27.4bp (8.1bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.580)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G C G A T A G C T A C G T C G T A C G T A C T A G C G T A A G T C C G T A C G T A A T C G C G T A 1e-11-2.590e+010.96%0.01%22.3bp (13.0bp)PB0123.1_Foxl1_2/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
12 * G T A C C G T A A C T G G A C T T A G C G A C T G T A C C A T G A T C G A T G C C T G A C T A G T A C G 1e-10-2.504e+013.98%0.72%26.5bp (26.9bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.647)
More Information | Similar Motifs Found		motif file (matrix)
13 * A C G T C G A T G A C T G T C A A C G T A C G T A C G T C G T A C G T A A C T G A C T G T C G A A T G C 1e-10-2.419e+010.96%0.01%26.4bp (9.5bp)HOXC10/MA0905.1/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
14 * A G C T A G T C G A T C C G T A A G T C G T A C G T C A C T A G A C T G A T C G T A G C G A C T A T C G A T G C C G T A A C T G 1e-10-2.399e+012.55%0.27%21.7bp (24.8bp)TFAP2A(var.2)/MA0810.1/Jaspar(0.529)
More Information | Similar Motifs Found		motif file (matrix)
15 * C T A G A C T G A C T G C T A G G T A C G T C A A G T C C G T A A C G T C G A T 1e-9-2.295e+012.39%0.25%20.0bp (28.0bp)ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer(0.653)
More Information | Similar Motifs Found		motif file (matrix)
16 * C G T A C G T A A C T G A C T G C G T A A G C T C T G A A C T G C G T A C G A T A C G T C G T A G A T C 1e-9-2.286e+010.96%0.01%23.5bp (13.0bp)HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer(0.639)
More Information | Similar Motifs Found		motif file (matrix)
17 * A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T 1e-9-2.286e+010.96%0.01%26.8bp (32.3bp)PB0079.1_Sry_1/Jaspar(0.647)
More Information | Similar Motifs Found		motif file (matrix)
18 * C T G A C G T A A T C G C G T A A C G T A C T G A T C G T A G C A T C G A C T G 1e-9-2.279e+012.87%0.39%32.3bp (31.3bp)YY1(Zf)/Promoter/Homer(0.907)
More Information | Similar Motifs Found		motif file (matrix)
19 * C T A G A C G T C A T G A C G T C T G A A G C T C T G A A G C T C T G A A C T G 1e-9-2.217e+012.23%0.22%25.0bp (37.7bp)PB0163.1_Six6_2/Jaspar(0.726)
More Information | Similar Motifs Found		motif file (matrix)
20 * A T C G A C G T T G A C A G C T A C G T C A T G A T G C C G T A A G C T C G T A A T G C G T A C G T A C G T C A G T A C A C G T 1e-9-2.147e+011.11%0.03%23.5bp (22.4bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.602)
More Information | Similar Motifs Found		motif file (matrix)
21 * A G C T T C A G G A C T A C G T A C G T A G C T C T A G T A C G A C G T T C G A A C T G A C G T C G A T 1e-9-2.121e+011.75%0.12%30.8bp (31.9bp)PB0121.1_Foxj3_2/Jaspar(0.685)
More Information | Similar Motifs Found		motif file (matrix)
22 * A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G 1e-9-2.089e+010.80%0.01%20.8bp (14.2bp)SD0003.1_at_AC_acceptor/Jaspar(0.613)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A T G C C T G A C G T A G T A C T A C G A C T G A C T G 1e-8-2.044e+010.64%0.00%23.8bp (0.0bp)COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer(0.630)
More Information | Similar Motifs Found		motif file (matrix)
24 * G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T 1e-8-2.044e+010.64%0.00%23.1bp (0.0bp)OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.610)
More Information | Similar Motifs Found		motif file (matrix)
25 * G T C A C T G A C T A G C T G A T C A G T G C A T C G A G T C A G T C A G T A C C G A T A C T G C T G A T G C A C G T A C G T A 1e-8-1.993e+011.91%0.18%20.3bp (19.5bp)IRF1/MA0050.2/Jaspar(0.619)
More Information | Similar Motifs Found		motif file (matrix)
26 * C T A G A C T G A C T G A T G C A G T C A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C T G 1e-8-1.947e+010.80%0.01%22.4bp (33.4bp)Sp1(Zf)/Promoter/Homer(0.696)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C T G T C G A A T C G A C T G A G T C A G T C T A G C G C T A A T G C A T G C T A C G C T G A T A G C A C G T A G T C A T G C 1e-8-1.880e+011.27%0.06%23.9bp (25.1bp)ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer(0.641)
More Information | Similar Motifs Found		motif file (matrix)
28 * A C G T A G C T G C A T G T C A C G A T A G C T A G C T C G A T C G T A C T A G A T G C A G C T A C G T A G C T A G T C G T C A 1e-8-1.870e+011.11%0.04%21.7bp (20.3bp)IRF1/MA0050.2/Jaspar(0.577)
More Information | Similar Motifs Found		motif file (matrix)
29 * C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T 1e-8-1.864e+012.55%0.39%30.0bp (26.0bp)Nr2e3/MA0164.1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
30 * A C G T C G A T A C T G C G T A C A T G A C G T C G T A A C G T A C G T C G T A A G T C C G A T C T A G A G C T A C G T A C T G 1e-7-1.768e+010.64%0.00%20.2bp (7.8bp)IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer(0.543)
More Information | Similar Motifs Found		motif file (matrix)
31 * A C G T C G A T T G C A G T A C A G T C C G T A T G A C C G A T A C G T C G A T 1e-7-1.665e+013.18%0.72%21.8bp (27.9bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.712)
More Information | Similar Motifs Found		motif file (matrix)
32 * C T G A C A T G C A T G A T C G G C A T A G T C G T C A A C G T C A T G T G A C T G C A A C G T C T A G 1e-6-1.558e+0110.83%5.55%25.7bp (27.8bp)PAX1/MA0779.1/Jaspar(0.646)
More Information | Similar Motifs Found		motif file (matrix)
33 * T G A C C A T G A C G T C T G A T A G C G A C T T A G C G A T C G A C T C G A T 1e-6-1.474e+010.48%0.00%20.0bp (9.8bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.687)
More Information | Similar Motifs Found		motif file (matrix)
34 * A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C 1e-6-1.474e+010.48%0.00%10.7bp (0.0bp)Sp1(Zf)/Promoter/Homer(0.635)
More Information | Similar Motifs Found		motif file (matrix)
35 * C T A G C A T G C G A T C G T A A C G T A C T G A C T G C G A T C G T A A C G T A C T G A C G T C T G A C G T A C G A T A C T G 1e-5-1.267e+010.48%0.01%27.5bp (29.7bp)TEF/MA0843.1/Jaspar(0.623)
More Information | Similar Motifs Found		motif file (matrix)
36 * T A G C T G A C G A T C A T G C C G T A C T A G C T A G T A C G T C A G A G T C G A C T A C T G A T G C 1e-5-1.245e+013.66%1.21%24.5bp (25.8bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.724)
More Information | Similar Motifs Found		motif file (matrix)
37 * C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T 1e-5-1.219e+010.64%0.02%19.6bp (16.8bp)NR2C2/MA0504.1/Jaspar(0.719)
More Information | Similar Motifs Found		motif file (matrix)