Information for 10-GGTCAGAGAT (Motif 37)

C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T
Reverse Opposite:
T G C A G A C T G A T C G A C T T A G C C A G T C A T G C G T A A T G C A G T C
p-value:1e-5
log p-value:-1.219e+01
Information Content per bp:1.535
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.2 +/- 19.6bp
Average Position of motif in Background55.4 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGAGAT--
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGAGAT--
GAGGTCAAAGGTCA
 A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGAGAT
AGGTCA-----
 A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGAGAT
AGRGGTCA-----
 A C G T A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGAGAT--
GAGGTCAAAGGTCA
 A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGAGAT--
GGGGTCAAAGGTCA
 A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGAGAT--
GGGGTCAAAGGTCA
 A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGAGAT--
GGGGTCAAAGGTCA
 A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T A C G T A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGAGAT
TRAGGTCA-----
 A C G T A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGTCAGAGAT
ATCAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T C T A G T A C G G C A T G T A C G T C A A T C G C T G A C T A G C T G A A C G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T