Information for 13-AAARAAGYTTYWT (Motif 29)

C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T
Reverse Opposite:
T C G A C G T A T C A G T C G A C G T A C T A G G A T C G A C T A G C T A G T C G A C T G A C T G A C T
p-value:1e-8
log p-value:-1.864e+01
Information Content per bp:1.446
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif184.2
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets53.8 +/- 30.0bp
Average Position of motif in Background51.7 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AAARAAGYTTYWT
----AAGCTTG--
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAARAAGYTTYWT---
-TAGAANVTTCTAGAA
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T A C G T A C G T A C G T
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAARAAGYTTYWT---
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AAARAAGYTTYWT---
---GAANNTTCTAGAA
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AAARAAGYTTYWT
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AAARAAGYTTYWT---
---GAANGTTCTAGAA
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAARAAGYTTYWT
---AAACMATTAN
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T
A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

HSF1/MA0486.2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AAARAAGYTTYWT---
---GAACGTTCTAGAA
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AAARAAGYTTYWT
--NGAAGC-----
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AAARAAGYTTYWT
CAAGACGCCTTA-
 C T G A C T G A C T G A T C A G T C G A C T G A C T A G G A T C G C A T A G C T A G T C G C A T A G C T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T