Information for 17-CATAGGCGCCGCC (Motif 34)

A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C A C G T C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 10.7bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CATAGGCGCCGCC---
----GGCCCCGCCCCC
 A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATAGGCGCCGCC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATAGGCGCCGCC--
CAAAGGCGTGGCCAG
 A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATAGGCGCCGCC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CATAGGCGCCGCC
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CATAGGCGCCGCC----
---NAGCCCCGCCCCCN
 A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CATAGGCGCCGCC----
-----GCTCCGCCCMCY
 A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CATAGGCGCCGCC------
--TACGCCCCGCCACTCTG
 A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATAGGCGCCGCC--
GCGGAGGTGTCGCCTC
 A C G T A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CATAGGCGCCGCC
-TTTGGCGCCAAA
 A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C T G A G T C A G T C
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A