Homer de novo Motif Results (hs_Embryonic_HUES64_normal_SRF_SRX702116_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 854
Total background sequences = 47853
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G C T T C G A A T C G G A C T C T A G G T A C A T G C G T C A A G T C G T A C G A C T C T G A A T C G G C A T A C T G A C T G 1e-483-1.113e+0352.34%2.28%15.7bp (28.7bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.961)
More Information | Similar Motifs Found		motif file (matrix)
2 T C G A A C T G C T A G C T A G A C T G C T A G G T A C A C T G A T G C A C G T A T C G A G C T A C G T 1e-55-1.267e+029.13%0.78%20.0bp (30.3bp)PB0076.1_Sp4_1/Jaspar(0.704)
More Information | Similar Motifs Found		motif file (matrix)
3 T A G C T A G C G A T C T G A C G A C T A T C G T A G C C G T A T A C G T A C G 1e-39-9.032e+0119.79%6.29%26.1bp (29.8bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.723)
More Information | Similar Motifs Found		motif file (matrix)
4 A C G T A C G T A C G T C T A G A C T G A G T C A G T C G T C A A G T C A G C T C T A G A C T G C T G A A C T G A C T G T A G C 1e-24-5.737e+011.76%0.02%14.9bp (17.5bp)CTCF/MA0139.1/Jaspar(0.688)
More Information | Similar Motifs Found		motif file (matrix)
5 G T C A A T G C C G T A A C T G T A G C G T C A A C T G T C G A A C T G C T A G A T C G G T C A A C T G G A T C A T G C T G C A 1e-15-3.472e+011.29%0.03%19.4bp (11.9bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.718)
More Information | Similar Motifs Found		motif file (matrix)
6 * T A C G A G T C G C A T A T C G T G C A T G A C T C G A A T C G G T C A C A T G A T C G T A C G A C T G 1e-11-2.663e+010.70%0.01%21.1bp (24.6bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.594)
More Information | Similar Motifs Found		motif file (matrix)
7 * A T C G A C T G C T A G C G T A C T G A C G T A G T A C A C G T T C G A A G T C C G T A A C T G A T C G 1e-11-2.621e+011.05%0.03%22.7bp (30.3bp)RELA/MA0107.1/Jaspar(0.637)
More Information | Similar Motifs Found		motif file (matrix)
8 * A G T C A G T C A G T C C G T A A G C T C G T A A G C T C G T A C G A T A C T G 1e-11-2.542e+010.94%0.02%22.1bp (17.0bp)SRF/MA0083.3/Jaspar(0.847)
More Information | Similar Motifs Found		motif file (matrix)
9 * A C G T C G T A T G A C A C G T C G T A A G T C C G A T A C T G G T C A C G T A A C G T A T C G C G T A 1e-9-2.250e+010.70%0.01%27.0bp (20.1bp)PB0028.1_Hbp1_1/Jaspar(0.602)
More Information | Similar Motifs Found		motif file (matrix)
10 * C T A G G T A C C G T A A C T G C A G T C G T A A C T G A T G C A T G C C G T A C G T A A C T G C T A G 1e-9-2.077e+010.82%0.02%23.5bp (24.2bp)PB0051.1_Osr2_1/Jaspar(0.691)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G A T C G A G T C C A T G A G T C G T A C A G T C C G A T A G T C A T G C C A G T A T C G G C A T 1e-8-1.941e+011.17%0.08%15.8bp (31.1bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.681)
More Information | Similar Motifs Found		motif file (matrix)
12 * A G T C A C T G C G A T A C T G G T C A A C T G A G T C A C G T A G T C G T C A 1e-7-1.796e+011.52%0.19%25.9bp (26.1bp)PB0044.1_Mtf1_1/Jaspar(0.655)
More Information | Similar Motifs Found		motif file (matrix)
13 * A G T C G C A T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A T C G A G T C C G A T A C T G 1e-7-1.709e+010.70%0.02%22.8bp (17.8bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.673)
More Information | Similar Motifs Found		motif file (matrix)
14 * G C A T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A T C A G 1e-5-1.288e+011.64%0.34%29.7bp (30.0bp)LIN54/MA0619.1/Jaspar(0.676)
More Information | Similar Motifs Found		motif file (matrix)