Homer de novo Motif Results (hs_CervixCarcinoma_HeLa_undef_TRAP_SRX1589765_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 772
Total background sequences = 48750
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C A T A T G C G A T C C A T G C A T G C T G A C T A G A G T C G A C T A T C G T A G C C A G T A C G T G C A T T C A G A C T G 1e-15-3.486e+012.20%0.13%21.3bp (23.8bp)NHLH1/MA0048.2/Jaspar(0.591)
More Information | Similar Motifs Found		motif file (matrix)
2 G C T A C G A T A G T C A C G T A C T G C T G A G T A C A C G T A G C T G T A C C G T A A C T G C A G T 1e-14-3.435e+012.20%0.13%18.6bp (24.9bp)Nr2e1/MA0676.1/Jaspar(0.671)
More Information | Similar Motifs Found		motif file (matrix)
3 C G T A C G T A C G T A C G T A A G C T C T G A A C G T A G T C A C G T A C T G A G C T A C T G A C G T 1e-13-3.147e+010.78%0.00%14.8bp (2.7bp)ZBTB18/MA0698.1/Jaspar(0.615)
More Information | Similar Motifs Found		motif file (matrix)
4 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A G T C C T A G A C G T 1e-13-3.147e+010.78%0.00%24.4bp (15.8bp)PB0208.1_Zscan4_2/Jaspar(0.625)
More Information | Similar Motifs Found		motif file (matrix)
5 A T G C G A C T G A C T G C T A A C G T C G T A C A G T A C T G C G T A C T A G A T C G A C T G G T C A C T G A C G T A C G T A 1e-13-3.097e+011.81%0.09%24.4bp (24.3bp)E2F7/MA0758.1/Jaspar(0.609)
More Information | Similar Motifs Found		motif file (matrix)
6 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C 1e-12-2.851e+011.94%0.13%20.3bp (22.2bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.555)
More Information | Similar Motifs Found		motif file (matrix)
7 A G T C A C G T A C G T A C T G C T A G A C T G A T C G C G T A G T C A C T G A C T A G A T C G A T G C 1e-12-2.810e+011.42%0.05%23.7bp (32.6bp)Pparg::Rxra/MA0065.2/Jaspar(0.642)
More Information | Similar Motifs Found		motif file (matrix)
8 C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T 1e-12-2.806e+015.56%1.50%20.9bp (27.7bp)HOXA5/MA0158.1/Jaspar(0.719)
More Information | Similar Motifs Found		motif file (matrix)
9 * C T G A A C G T C G A T A G T C C G T A A C G T A C T G C G T A A T C G A G C T A C G T A C G T G T C A 1e-11-2.732e+010.78%0.00%29.0bp (6.7bp)PB0178.1_Sox8_2/Jaspar(0.667)
More Information | Similar Motifs Found		motif file (matrix)
10 * A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T 1e-11-2.633e+011.03%0.02%20.8bp (18.8bp)RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer(0.691)
More Information | Similar Motifs Found		motif file (matrix)
11 * A G T C A G T C T C A G A G T C G T C A A T C G G T C A A C T G A T C G C T G A A G T C C T A G A G T C 1e-11-2.580e+012.07%0.19%23.2bp (27.9bp)HINFP/MA0131.2/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
12 * A C G T G T A C A C G T G T C A A C G T A C T G G T A C G T A C A G T C C G T A C T A G A C G T C G T A 1e-11-2.553e+010.65%0.00%11.2bp (0.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.638)
More Information | Similar Motifs Found		motif file (matrix)
13 * T C A G C T A G A T C G A C T G A T C G A G T C A G T C A C G T A C T G A C T G A C T G A G T C G T C A A G T C A G T C A G T C 1e-11-2.553e+010.65%0.00%24.3bp (0.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.665)
More Information | Similar Motifs Found		motif file (matrix)
14 * A T G C A G T C A G T C C G T A A C G T A G T C A G T C A C G T A T C G A G C T A C G T A G C T A G T C A G T C A G C T A C G T 1e-11-2.553e+010.65%0.00%9.5bp (0.0bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.566)
More Information | Similar Motifs Found		motif file (matrix)
15 * A G T C A C G T A C T G A C T G C T G A A C G T A G C T A G T C A G T C C G A T A C T G T G C A A G T C A G T C A C T G A C T G 1e-11-2.553e+010.65%0.00%20.5bp (0.0bp)TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.576)
More Information | Similar Motifs Found		motif file (matrix)
16 * A C T G A C T G G T A C C G A T A C T G G T C A T G C A G T C A C T G A A T G C C G T A G T A C C G T A A G T C T G C A T G C A 1e-11-2.541e+011.16%0.03%27.1bp (24.1bp)Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer(0.565)
More Information | Similar Motifs Found		motif file (matrix)
17 * A T G C C G T A A G T C C G T A A T C G C T A G C T A G C G T A A C T G T A C G C T G A G C T A A C G T C T G A G A C T G C T A 1e-11-2.541e+011.16%0.03%23.8bp (25.0bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.607)
More Information | Similar Motifs Found		motif file (matrix)
18 * A G T C A G C T A G C T A C G T C A T G A C T G C G A T C G A T T C G A C G T A C G A T G C T A C G A T 1e-10-2.498e+012.72%0.40%29.0bp (28.5bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.628)
More Information | Similar Motifs Found		motif file (matrix)
19 * T A C G G T C A A T G C C G T A A C G T A C T G A C T G A C G T C A G T A C G T G A T C A C G T A C G T A C T G C G A T T A C G 1e-10-2.402e+011.29%0.06%15.9bp (26.1bp)PB0035.1_Irf5_1/Jaspar(0.588)
More Information | Similar Motifs Found		motif file (matrix)
20 * A G T C C T A G A C G T A C T G A T G C C G T A A T C G T G C A G T A C A T C G 1e-10-2.376e+011.68%0.13%22.2bp (25.7bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.707)
More Information | Similar Motifs Found		motif file (matrix)
21 * T C A G G T C A C G A T A T C G A G C T G A T C A T G C G A T C G T A C G T A C C G T A A C T G A C T G G A C T A T C G T C A G 1e-10-2.311e+010.91%0.02%13.9bp (19.8bp)E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.580)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C T G A C T G A C T G C T A G A T C G A G T C A G T C A G C T A G T C C G T A A T G C G T A C A T G C 1e-9-2.287e+011.03%0.03%16.3bp (20.6bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.656)
More Information | Similar Motifs Found		motif file (matrix)
23 * A G T C A C G T A C G T A C G T A G C T C G A T C T A G C G T A A C T G A G T C A C G T G T C A A C G T 1e-9-2.208e+010.65%0.00%25.1bp (9.4bp)PH0068.1_Hoxc13/Jaspar(0.588)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C T G C G T A A C T G A T C G C T A G A G C T A C T G C G A T A C T G A C T G A C T G A C G T G T A C C G T A A C T G A C T G 1e-9-2.208e+010.65%0.00%23.3bp (12.4bp)GCM2/MA0767.1/Jaspar(0.619)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C T G C T A G A T C G G T C A G C T A C G T A G T C A C G T A C G T A A G C T C A G T A C T G A G T C A G C T A G T C A G T C 1e-9-2.187e+011.16%0.05%12.3bp (22.5bp)EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer(0.588)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C A G T C C G T A A C T G A C T G T C G A A G T C A C G T A G T C A C G T A T C G A T G C A G T C 1e-9-2.187e+010.78%0.01%26.7bp (14.3bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.642)
More Information | Similar Motifs Found		motif file (matrix)
27 * G A C T A T G C G A T C G T A C A G T C A G T C C A G T C T A G T C A G C T G A 1e-9-2.130e+0113.71%7.33%25.1bp (27.0bp)PB0204.1_Zfp740_2/Jaspar(0.734)
More Information | Similar Motifs Found		motif file (matrix)
28 * C G T A C G A T C G T A A C T G T C A G C G T A A C G T G T A C C G T A A G T C 1e-9-2.125e+011.42%0.10%27.6bp (24.9bp)PB0196.1_Zbtb7b_2/Jaspar(0.625)
More Information | Similar Motifs Found		motif file (matrix)
29 * A C G T G C T A C T G A A T G C G T C A A C G T G A C T C G A T A C T G C T A G A T G C G A T C A C G T A G T C G A C T A G T C 1e-8-1.998e+013.10%0.69%23.7bp (25.5bp)NR2F1/MA0017.2/Jaspar(0.665)
More Information | Similar Motifs Found		motif file (matrix)
30 * A C G T A C T G C G T A A C G T C G T A A C T G A G T C A G T C A T C G C G T A A C T G A C T G C G T A 1e-8-1.977e+010.52%0.00%28.0bp (0.0bp)PB0059.1_Six6_1/Jaspar(0.662)
More Information | Similar Motifs Found		motif file (matrix)
31 * A G T C A G T C A C G T A T G C A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T 1e-8-1.977e+010.52%0.00%17.6bp (0.0bp)Gfi1/MA0038.1/Jaspar(0.617)
More Information | Similar Motifs Found		motif file (matrix)
32 * C T G A A G T C C G A T A C T G A G T C A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C T G 1e-8-1.977e+010.52%0.00%22.6bp (0.0bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.621)
More Information | Similar Motifs Found		motif file (matrix)
33 * A C G T A T G C C G A T A T C G T C G A C T G A A C T G A G T C A G C T A C G T A T C G C T G A A C T G 1e-8-1.936e+011.03%0.05%31.8bp (25.9bp)Nr2e3/MA0164.1/Jaspar(0.684)
More Information | Similar Motifs Found		motif file (matrix)
34 * C T G A A T G C A C G T C T A G A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A C G T 1e-8-1.880e+010.91%0.03%26.0bp (17.8bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.595)
More Information | Similar Motifs Found		motif file (matrix)
35 * A G T C A C T G A C G T A G T C T C G A A T G C A T C G A T G C T A C G A C G T A C T G C G T A A G T C 1e-8-1.864e+010.65%0.01%25.0bp (15.8bp)PAX1/MA0779.1/Jaspar(0.751)
More Information | Similar Motifs Found		motif file (matrix)
36 * C A G T T C G A C G T A C G T A C T G A A C T G C G T A A C T G G T C A C T G A C T A G A C T G A C T G A C G T A G C T A C T G 1e-7-1.836e+010.91%0.03%26.4bp (30.7bp)SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer(0.687)
More Information | Similar Motifs Found		motif file (matrix)
37 * A C T G A T C G A C G T A G C T C A T G C G T A A T C G A T G C C G T A C T A G C G T A A C T G A G T C C G A T A C T G G T C A 1e-7-1.747e+011.29%0.11%20.9bp (22.7bp)Pparg::Rxra/MA0065.2/Jaspar(0.578)
More Information | Similar Motifs Found		motif file (matrix)
38 * A C T G A C G T A T G C C G T A A G T C A C G T C G T A A G T C A C G T A C T G C T A G C G T A A C T G 1e-7-1.701e+010.52%0.01%3.7bp (23.9bp)PB0051.1_Osr2_1/Jaspar(0.553)
More Information | Similar Motifs Found		motif file (matrix)
39 * G T A C A G C T C A G T C G T A T C A G G T A C C G T A A G T C A G T C C G T A A C T G A G C T T C G A 1e-7-1.699e+011.03%0.06%27.2bp (24.4bp)Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer(0.705)
More Information | Similar Motifs Found		motif file (matrix)
40 * C G T A A C T G A C T G C G T A C G T A A C G T G T A C A G T C C T A G C G T A 1e-6-1.592e+010.91%0.05%18.5bp (30.3bp)TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.717)
More Information | Similar Motifs Found		motif file (matrix)
41 * A C T G G T A C C A T G A C T G T G A C A G T C C T A G C G T A C T A G C T A G 1e-6-1.486e+017.89%3.93%25.8bp (27.4bp)POL008.1_DCE_S_I/Jaspar(0.596)
More Information | Similar Motifs Found		motif file (matrix)
42 * G T A C G C A T C T A G A G C T A G T C C G T A A G C T A G T C C A T G A C G T 1e-6-1.483e+011.94%0.37%22.4bp (27.0bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.692)
More Information | Similar Motifs Found		motif file (matrix)
43 * A C G T A T G C T A C G A C G T C G T A T G A C C T A G C T G A G T C A C A G T 1e-6-1.468e+012.07%0.43%23.6bp (26.2bp)PB0136.1_IRC900814_2/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
44 * C G T A A G T C A C G T A G T C A C T G C G T A A C T G A G T C A C G T A T C G 1e-6-1.426e+010.52%0.01%26.5bp (20.6bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.619)
More Information | Similar Motifs Found		motif file (matrix)