Information for 3-GVGTCCAGACACTCCC (Motif 6)

A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
Reverse Opposite:
A C T G A C T G A T C G C T G A A C T G A C G T A T C G A C G T A T G C C G A T A C T G A C T G T C G A A G T C A T C G A G T C
p-value:1e-12
log p-value:-2.851e+01
Information Content per bp:1.712
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif65.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.7 +/- 20.3bp
Average Position of motif in Background48.1 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GVGTCCAGACACTCCC
--GGCCACACCCAN--
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GVGTCCAGACACTCCC
--GGACACACCCCC--
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GVGTCCAGACACTCCC
CAAATCCAGACATCACA
 A C G T A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GVGTCCAGACACTCCC
--GGCCACACCCA---
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GVGTCCAGACACTCCC
---GCCACRCCCACY-
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GVGTCCAGACACTCCC
-ATGCCAGACN-----
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GVGTCCAGACACTCCC
----CCAGACRSVB--
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GVGTCCAGACACTCCC
----CCAGACAG----
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GVGTCCAGACACTCCC-
-------GCCMCRCCCH
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GVGTCCAGACACTCCC--
-------GCCACGCCCCC
 A C T G T A G C A C T G A G C T A G T C A G T C C G T A T A C G T C G A T A G C G T C A A G T C A G C T A T G C G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C