Information for 2-AATTTSTGCT (Motif 8)

C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
Reverse Opposite:
C G T A C T A G A G T C C G T A T A C G C G T A C T G A T C G A A G C T G A C T
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.702
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif731.9
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets39.5 +/- 20.9bp
Average Position of motif in Background49.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATTTSTGCT
AATTAGTG--
 C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AATTTSTGCT
AAATCACTGC-
 A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AATTTSTGCT
AAATCACAGCA
 A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PH0156.1_Rax/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AATTTSTGCT
NNGCGCTAATTAGTGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
C T A G A C G T A T C G T A G C C T A G A G T C G A C T T C G A C T G A A G C T A C G T C T G A T C A G A G C T T A C G A T G C G C T A

PH0110.1_Nkx1-2/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AATTTSTGCT
GTGCACTAATTAGTGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
C A T G C A G T A C T G T G A C T C G A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A C G T C T A G A T G C G C T A

PH0033.1_Gbx1/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AATTTSTGCT
TGCCACTAATTAGTGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATTTSTGCT----
ANATTTTTGCAANTN
 A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PH0039.1_Mnx1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATTTSTGCT-
GTACTAATTAGTGGCG
 A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

PH0062.1_Hoxb7/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATTTSTGCT-
GTAGTAATTAATGCAA
 A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0029.1_En2/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------AATTTSTGCT
NTNCACTAATTAGNGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G C T A G C T G C A T A T G C C G A T C T A G A G T C C G A T
C G A T C A G T A G T C T A G C C T G A G A T C G A C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T C A T G A G T C G C T A