Information for 4-GGGCAAGGTCATGCCT (Motif 10)

A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
Reverse Opposite:
C T G A C T A G C T A G T G A C G T C A A G C T T C A G T G C A T A G C A G T C G C A T A C G T A C T G T A G C A G T C A G T C
p-value:1e-11
log p-value:-2.633e+01
Information Content per bp:1.699
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.5 +/- 20.8bp
Average Position of motif in Background60.7 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGTCATGCCT
AGGTCAAGGTCA-----
 A C G T A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGTCATGCCT
AGGTCAAGGTCA-----
 A C G T A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGCAAGGTCATGCCT
-BTCAAGGTCA-----
 A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAGGTCATGCCT
AAGTTCAAGGTCAGC---
 A C G T A C G T A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGGCAAGGTCATGCCT
---CAAGGHCANV---
 A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGCAAGGTCATGCCT
--TCAAGGTCAT----
 A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCAAGGTCATGCCT
-NTCAAGGTCA-----
 A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGTCATGCCT
TATTCAAGGTCATGCGA
 A C G T A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCAAGGTCATGCCT
-TTCAAGGTCAT----
 A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGCAAGGTCATGCCT
--TCAAGGTCATA---
 A C T G C T A G A T C G A G T C G T C A C G T A A C T G A T C G A C G T A G T C C T G A A C G T A C T G A G T C G A T C A G C T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T