Homer de novo Motif Results (hs_CervicalCarcinoma_HeLaS3_cancer_USF2_SRX150640_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 788
Total background sequences = 46880
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C C T G A T C A G C T A G C T A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G T A C G A T C 1e-117-2.696e+0214.21%0.54%17.8bp (32.5bp)TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer(0.945)
More Information | Similar Motifs Found
motif file (matrix)
2 C T A G C A T G T C G A G C A T C A T G G C T A A T G C G C A T T G A C G T C A 1e-67-1.560e+0215.99%2.13%23.3bp (33.4bp)JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer(0.978)
More Information | Similar Motifs Found
motif file (matrix)
3 C T G A G T A C G T A C C G T A A T G C G A C T C G T A C A T G T C A G C A T G A C T G C A T G G T A C T C G A T C A G G A C T 1e-67-1.559e+028.25%0.31%22.1bp (27.8bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.923)
More Information | Similar Motifs Found
motif file (matrix)
4 G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A 1e-13-3.113e+010.76%0.00%18.8bp (0.0bp)PB0119.1_Foxa2_2/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
5 * C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A 1e-11-2.727e+012.92%0.43%29.1bp (31.0bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
6 * A G T C C G T A A C T G A C T G T C G A C G T A A C G T A T C G A G T C G T A C C T A G G T A C A G C T 1e-11-2.588e+011.02%0.02%26.3bp (24.7bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.802)
More Information | Similar Motifs Found
motif file (matrix)
7 * A G C T T A G C C T G A A G T C C T G A A C G T A C G T C T A G G T C A G T A C A G C T A G T C C G T A 1e-10-2.524e+010.63%0.00%29.3bp (9.7bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.598)
More Information | Similar Motifs Found
motif file (matrix)
8 * T C A G G T A C T C G A A C G T A C T G C G A T C A T G C T A G A G T C C G T A 1e-9-2.282e+013.55%0.80%25.7bp (31.9bp)MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.681)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A C T G A C T G A C G T C A T G T A G C A G C T C G A T A T G C A G C T A C T G A C T G A C T G 1e-9-2.242e+011.02%0.03%24.7bp (29.6bp)FIGLA/MA0820.1/Jaspar(0.598)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C C G T A A C T G A C T G A C T G A C G T C G A T C G T A G A C T C G T A 1e-9-2.215e+011.27%0.07%26.9bp (24.9bp)Spz1/MA0111.1/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G A T T A C G G A C T C G A T A T C G T A G C C A T G G T C A T G C A C T G A 1e-9-2.213e+0116.50%9.38%27.1bp (30.2bp)CEBPE/MA0837.1/Jaspar(0.821)
More Information | Similar Motifs Found
motif file (matrix)
12 * A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T 1e-9-2.195e+012.16%0.29%29.1bp (26.0bp)Sp1(Zf)/Promoter/Homer(0.825)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C A C G T A G T C A G T C G C A T A T C G A G T C C G T A A T C G A T C G A C G T A C T G C G T A 1e-9-2.190e+010.89%0.02%21.4bp (29.4bp)Id2/MA0617.1/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A A G T C A C G T C T G A A C G T A C T G A G T C C G A T C G A T C G T A C T G A A C T G A C T G 1e-9-2.179e+010.63%0.01%15.3bp (24.2bp)PH0148.1_Pou3f3/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C G T A G T C T A G C C T A G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G A T G C G T C A C G T A 1e-8-1.954e+010.51%0.00%23.1bp (0.0bp)NFIA/MA0670.1/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T A C A G T C C T G A T C A G T G A C A G C T G T C A T C A G A T G C A G T C 1e-8-1.936e+011.90%0.26%25.2bp (27.8bp)Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
17 * T C A G G T C A A C G T G A C T G T A C G T A C C G T A G T C A C G A T C A T G A T C G C T G A T A C G 1e-8-1.897e+011.78%0.23%22.0bp (28.6bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.600)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C 1e-6-1.550e+011.14%0.10%29.6bp (32.3bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.759)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A C G T A C T G C T A G A C T G A G T C A C T G A G T C A G T C A G T C G T C A A G T C C T A G 1e-6-1.407e+010.38%0.00%11.1bp (0.0bp)PB0052.1_Plagl1_1/Jaspar(0.781)
More Information | Similar Motifs Found
motif file (matrix)
20 * A T C G A C G T A C G T A G C T C G T A A T G C T C A G A C G T C T G A C G T A 1e-5-1.182e+011.02%0.12%27.8bp (30.5bp)GMEB2/MA0862.1/Jaspar(0.826)
More Information | Similar Motifs Found
motif file (matrix)