Information for 5-CATGTTATTMTGAKCA (Motif 4)

G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
Reverse Opposite:
A C G T A T C G T G A C G A C T A G T C G T C A A C T G C G T A T G C A C G A T C T G A C G T A A G T C T G C A A C G T C A T G
p-value:1e-13
log p-value:-3.113e+01
Information Content per bp:1.727
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.1 +/- 18.8bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CATGTTATTMTGAKCA
NCNTTTGTTATTTNN----
 A C G T A C G T A C G T G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATGTTATTMTGAKCA
NAGGTCACNNTGACC-
 G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATGTTATTMTGAKCA
NNNTGTTGTTGTTNG--
 A C G T G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CATGTTATTMTGAKCA
AAAATACATGTAATACT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CATGTTATTMTGAKCA
AAAATACATGTAAAAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATGTTATTMTGAKCA
-CTGTTGCTAGGS---
 G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CATGTTATTMTGAKCA
AATATACATGTAAAATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CATGTTATTMTGAKCA
AATATACATGTAAAACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CATGTTATTMTGAKCA
AATATACATGTAATATA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CATGTTATTMTGAKCA-
CAGGTCACCGTGACCTT
 G A T C G T C A A C G T C T A G A C G T A G C T C G T A A C G T A C G T G T A C A C G T A C T G C G T A A C T G T A G C G T C A A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T