Information for 7-AGTGGTGGAA (Motif 5)

C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
Reverse Opposite:
G C A T C G A T A G T C G T A C C G T A G T A C A G T C T G C A A G T C C G A T
p-value:1e-11
log p-value:-2.727e+01
Information Content per bp:1.558
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif199.4
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets51.3 +/- 29.1bp
Average Position of motif in Background50.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGTGGTGGAA
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGTGGAA--
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGGTGGAA
-GTGGAT---
 C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGTGGAA
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGTGGAA
TTGAGTGSTT---
 A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGTGGAA
TTAAGTGGT----
 A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGTGGAA
CTYRAGTGSY----
 A C G T A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGTGGTGGAA
BTBRAGTGSN----
 A C G T A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGTGGAA
TTAAGTGGN----
 A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGTGGAA---
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T C G T A T C A G A C G T T C A G C A T G G C A T C A T G T C A G G C T A C G T A A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A