Information for 12-CGCCCCGCCT (Motif 12)

A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A G T C A T C G A T C G A C T G C A T G G T A C T A C G
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.860
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif134.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets52.3 +/- 29.1bp
Average Position of motif in Background49.5 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCCCCGCCT--
GGCCCCGCCCCC
 A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CGCCCCGCCT------
-GCCCCGCCCCCTCCC
 A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCCGCCT---
NNGGCCACGCCTTTN
 A C G T A C G T A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CGCCCCGCCT-----
TACGCCCCGCCACTCTG
 A C G T A C G T A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCCGCCT---
NAGCCCCGCCCCCN
 A C G T A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CGCCCCGCCT--
-GCCCCGCCCCC
 A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T A C G T
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGCCCCGCCT-
-GCCMCRCCCH
 A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T
A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGCCCCGCCT-
-GCCCCGCCCC
 A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGCCCCGCCT---
-GCTCCGCCCMCY
 A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T A C G T A C G T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGCCCCGCCT-
-GCCCCACCCA
 A T G C A C T G G T A C A G T C A T G C A T G C A C T G A G T C A G T C A G C T A C G T
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A