Homer de novo Motif Results (hs_BreastAdenocarcinoma_MDAMB231_undef_BRG1_SRX1156538_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 711
Total background sequences = 19643
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T A C A C G T A G C T G T A C C G T A A C G T A C T G A C T G A G T C T G A C 1e-13-3.202e+012.25%0.14%29.9bp (23.7bp)Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.730)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T C G T A A C G T A C G T G A C T A C T G A C T G A C G T A C G T A T G C A G T C A C G T C G A T 1e-13-3.178e+010.99%0.01%27.9bp (0.0bp)PB0121.1_Foxj3_2/Jaspar(0.611)
More Information | Similar Motifs Found
motif file (matrix)
3 A C T G G C T A C G T A A G C T A C T G A C G T A C T G A T C G A C G T C G T A C G A T C G A T C G T A 1e-13-3.178e+010.99%0.00%24.2bp (0.0bp)PH0162.1_Six2/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
4 T A G C A C G T A T G C A G C T A G T C A G C T A C T G A G T C C G A T T A C G 1e-13-3.045e+018.45%2.76%26.0bp (29.5bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
5 G T A C C G A T A T C G C A G T T A C G G A C T A G C T G A C T G C T A G C A T 1e-12-2.929e+013.52%0.52%26.2bp (29.5bp)FOXP1/MA0481.1/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
6 C T G A T A C G C G A T T A C G C T G A C T G A A C G T C T A G C A T G C A T G T C A G C G A T A G T C 1e-12-2.845e+011.13%0.02%23.2bp (18.4bp)PB0132.1_Hbp1_2/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
7 C G T A C G T A C T A G C G T A A C G T C T G A C G T A A C T G C G T A C T A G G T C A A T G C C G T A A G C T G A T C C G T A 1e-12-2.845e+011.13%0.02%24.9bp (10.8bp)GATA3/MA0037.2/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
8 * A T G C G A T C A C T G A C T G A T G C T A C G A T C G A G T C C G T A A C T G G T C A A C T G T A C G 1e-11-2.745e+011.83%0.11%26.8bp (20.8bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.603)
More Information | Similar Motifs Found
motif file (matrix)
9 * A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T 1e-11-2.696e+010.99%0.01%20.1bp (34.5bp)PB0169.1_Sox15_2/Jaspar(0.702)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G C T G T C A A G C T T A G C G C T A G A T C G T A C C G T A C G T A C T A G C G T A A T C G A T G C G C A T A C G T T A C G 1e-11-2.662e+011.41%0.05%28.8bp (32.1bp)NKX2-3/MA0672.1/Jaspar(0.523)
More Information | Similar Motifs Found
motif file (matrix)
11 * G A T C C G T A A C G T A C T G C G T A C G T A C G T A A G C T C T G A C G T A A C G T G T C A C G T A 1e-11-2.651e+010.85%0.01%34.8bp (30.2bp)PB0096.1_Zfp187_1/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
12 * C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A 1e-11-2.619e+011.13%0.02%17.7bp (11.9bp)Hand1::Tcf3/MA0092.1/Jaspar(0.659)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A C T G A C G A T A C G T T G C A T C G A A G T C C G T A A C T G A C T G A T G C C G T A C T A G 1e-11-2.560e+011.41%0.06%21.6bp (22.2bp)PH0128.1_Otp/Jaspar(0.667)
More Information | Similar Motifs Found
motif file (matrix)
14 * A T C G G C T A A G T C A C G T A C G T A G C T C G T A A C T G C T A G T C A G 1e-10-2.527e+013.52%0.63%30.4bp (26.0bp)Nr2e1/MA0676.1/Jaspar(0.657)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A C T G A C G A T C G T A A G T C G T C A A C T G C G T A C G T A C G T A A T C G A T C G A G T C 1e-10-2.415e+010.99%0.02%20.2bp (25.2bp)PB0137.1_Irf3_2/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C C G T A A T G C C A T G A C G T C G T A A C G T A G T C G A C T C G A T 1e-10-2.384e+011.41%0.07%26.9bp (30.0bp)HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer(0.766)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A C A T G A C G T C A T G T C G A C G T A G A T C A G T C G A C T A G T C 1e-10-2.347e+011.69%0.11%25.6bp (25.1bp)PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer(0.606)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C G T A G C T G T A C G T A C A C G T A C G T G T A C A G T C G C T A A C G T 1e-9-2.256e+013.38%0.66%23.6bp (27.0bp)EWSR1-FLI1/MA0149.1/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G A T G C G T A C A G T C A C G T 1e-9-2.238e+010.85%0.01%24.0bp (8.0bp)NFIX/MA0671.1/Jaspar(0.543)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G C G T A C G A T A C G T A G T C A G T C C G T A C T A G C G A T C A G T 1e-9-2.185e+012.11%0.24%26.8bp (30.8bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.714)
More Information | Similar Motifs Found
motif file (matrix)
21 * C T G A C T G A C G T A A C T G C G T A G T A C C G T A C G A T G T C A C T A G A C T G G T C A C G T A 1e-9-2.140e+010.70%0.00%32.0bp (0.0bp)PB0166.1_Sox12_2/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G T A C G A T C G T A C G T A C G A T A C G T A G T C C G T A A T G C A C G T A C G T A G T C A C T G C G T A A C G T A C G T 1e-9-2.140e+010.70%0.00%20.0bp (0.0bp)PH0114.1_Nkx2-5/Jaspar(0.578)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G C T C G T A G T A C C G T A C G A T C G T A A C G T C G T A A C G T C G A T C T A G G C A T A G C T A C G T C G A T C A G T 1e-9-2.140e+010.70%0.00%29.9bp (0.0bp)PB0074.1_Sox8_1/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A 1e-8-1.998e+010.85%0.02%29.8bp (20.2bp)PH0012.1_Cdx1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G C T G C T A C T A G A G T C A G C T A G C T A C G T A C T G T A G C A G C T A T G C C G A T A C T G 1e-7-1.828e+010.85%0.03%13.9bp (19.7bp)PB0084.1_Tcf7l2_1/Jaspar(0.626)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G T A C G T A A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T 1e-7-1.647e+010.56%0.01%8.4bp (25.7bp)NFIC/MA0161.1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T C G T A A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T 1e-7-1.647e+010.56%0.00%18.0bp (0.0bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.601)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T 1e-7-1.647e+010.56%0.01%22.8bp (1.3bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.560)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A C T G C G T A C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C T G A C G T 1e-7-1.647e+010.56%0.01%21.4bp (0.0bp)IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer(0.767)
More Information | Similar Motifs Found
motif file (matrix)
30 * T C G A G T A C A C G T A G T C C G A T A G C T G C T A A C G T A C T G A G C T 1e-7-1.637e+011.69%0.22%30.3bp (27.0bp)GATA3/MA0037.2/Jaspar(0.713)
More Information | Similar Motifs Found
motif file (matrix)
31 * C T A G A T C G T C A G T A C G G T A C T A G C A G T C T A G C A C T G T A C G 1e-6-1.583e+015.77%2.30%26.4bp (20.6bp)PB0052.1_Plagl1_1/Jaspar(0.768)
More Information | Similar Motifs Found
motif file (matrix)