Information for 8-RGCCAGAGCTAGW (Motif 12)

C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
Reverse Opposite:
G C A T T A G C A G C T G C T A A C T G A T G C A C G T A G T C C G A T C T A G C T A G A G T C G A T C
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.718
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.2 +/- 17.7bp
Average Position of motif in Background50.8 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RGCCAGAGCTAGW
ATGCCAGACN----
 A C G T C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGCCAGAGCTAGW
TGCCAA-------
 C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RGCCAGAGCTAGW
-GCCACACCCA--
 C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RGCCAGAGCTAGW
CGTGCCAAG------
 A C G T A C G T C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RGCCAGAGCTAGW
GAGSCCGAGC----
 A C G T C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RGCCAGAGCTAGW
GGCCACACCCAN-
 C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RGCCAGAGCTAGW
--CCATATATGG-
 C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RGCCAGAGCTAGW
GGCCACACCCA--
 C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RGCCAGAGCTAGW
NGNTCTAGAACCNGV
 A C G T A C G T C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RGCCAGAGCTAGW
-KCCAAAAATAGC
 C T A G T C A G A G T C A G T C C G T A C T A G C G T A T A C G A G T C C G A T C T G A A C T G C G T A
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C