Information for 14-TTAGGGTATTAAA (Motif 24)

A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A C G T A C G A T C G T A A T G C A G T C G A T C A C G T C T G A C G T A
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.889
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.7 +/- 29.8bp
Average Position of motif in Background66.4 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0012.1_Cdx1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTAGGGTATTAAA----
-TAAGGTAATAAAATTA
 A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:forward strand
Alignment:TTAGGGTATTAAA
-------ATTAAA
 A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTAGGGTATTAAA
---CGGTTTCAAA
 A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAGGGTATTAAA---
TTAAGGGGATTAACTAC
 A C G T A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTAGGGTATTAAA----
TAGAGGGATTAAATTTC
 A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAGGGTATTAAA---
AATAGGGTATCAATATT
 A C G T A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTAGGGTATTAAA----
-AAAGGTAATAAAATTT
 A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTAGGGTATTAAA---
AATAGGGTATCATATAT
 A C G T A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTAGGGTATTAAA---
AATAGGGTATCAATTAT
 A C G T A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTAGGGTATTAAA-----
-TTAGGTCGTAAAATTTC
 A C G T A G C T C G T A C A T G A C T G A T C G A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C