Information for 6-TTKGAATGAGATT (Motif 9)

A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T A G T C A C G T A G T C C G T A A G C T G A C T G A T C G T C A C G T A C T G A
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.807
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 20.1bp
Average Position of motif in Background49.0 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTKGAATGAGATT---
-TTGAATGAAATTCGA
 A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTKGAATGAGATT
ATTTGAATT-----
 A C G T A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTKGAATGAGATT-
--GTAATCDGATTA
 A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T
A C G T A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTKGAATGAGATT-
--YTAATYNRATTA
 A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T
A C G T A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTKGAATGAGATT--
---TAATTNVATTAN
 A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTKGAATGAGATT-
ATTTGCATAACAATG
 A C G T A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTKGAATGAGATT-
---TAATTAAATTA
 A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTKGAATGAGATT-
---TAATTAAATTA
 A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTKGAATGAGATT--
-----CNGTGATTTN
 A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTKGAATGAGATT-
ATTTGCATAACAAAG
 A C G T A G C T A C G T A C G T C T A G C T G A C T G A A C G T C T A G C G T A T C A G C G T A A G C T A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G