Homer de novo Motif Results (hs_Squamouscellcarcinom_SCC9_undef_CHD4_SRX2741422_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 816
Total background sequences = 48802
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T A G T C G T C A G A C T A T G C 1e-34-7.852e+019.07%1.46%24.3bp (25.6bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.965)
More Information | Similar Motifs Found		motif file (matrix)
2 T A G C A C G T A C G T A C T G C G A T A C T G G A T C G T C A C G T A A G C T 1e-17-3.965e+014.66%0.78%26.3bp (27.6bp)CEBPA/MA0102.3/Jaspar(0.918)
More Information | Similar Motifs Found		motif file (matrix)
3 A G T C T G C A A T G C A G T C C G T A A C T G T C A G T C A G C T A G A C T G G T A C A C T G A G T C 1e-16-3.692e+013.06%0.32%26.8bp (28.8bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.867)
More Information | Similar Motifs Found		motif file (matrix)
4 T G C A T C G A G T C A G A T C T A G C C G T A T A G C C T G A A C T G T A C G 1e-13-3.029e+016.25%1.81%25.2bp (26.4bp)RUNX1/MA0002.2/Jaspar(0.892)
More Information | Similar Motifs Found		motif file (matrix)
5 * A C G T T C A G C G T A A C T G A T G C C G T A A C G T C T A G A C T G A G T C C G T A C G T A A C T G 1e-11-2.700e+010.74%0.01%20.1bp (9.3bp)SD0002.1_at_AC_acceptor/Jaspar(0.585)
More Information | Similar Motifs Found		motif file (matrix)
6 * A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A 1e-11-2.683e+010.98%0.02%17.5bp (21.1bp)Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer(0.640)
More Information | Similar Motifs Found		motif file (matrix)
7 * A G T C A C G T A G C T A G T C A C G T A G T C A G T C A G C T A G T C A G T C C A G T A T G C C G A T 1e-11-2.546e+011.59%0.10%28.5bp (25.7bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.645)
More Information | Similar Motifs Found		motif file (matrix)
8 * C G T A A C T G A C T G G T A C A T C G A C T G C T G A C T G A A C T G A G T C A G T C A C T G A T C G 1e-10-2.458e+010.74%0.01%20.7bp (31.0bp)PB0124.1_Gabpa_2/Jaspar(0.719)
More Information | Similar Motifs Found		motif file (matrix)
9 * C G T A A T G C C G T A A C T G C T A G C T G A A T G C C G T A A C T G C G T A T A C G A C G T C T A G 1e-10-2.439e+011.10%0.04%18.3bp (23.7bp)GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer(0.605)
More Information | Similar Motifs Found		motif file (matrix)
10 * A G T C A C G T A C G T G C A T A T C G A G T C C G T A A C T G A T G C C G T A A C G T A C G T A G T C 1e-9-2.287e+010.74%0.01%29.0bp (36.4bp)PH0158.1_Rhox11_2/Jaspar(0.601)
More Information | Similar Motifs Found		motif file (matrix)
11 * A T G C C G A T A C T G A C T G G T C A C G T A C G T A A C G T C G T A A T C G A T G C A C G T A C G T 1e-9-2.273e+010.86%0.02%28.9bp (20.4bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.675)
More Information | Similar Motifs Found		motif file (matrix)
12 * C G A T A C T G A T C G T G A C C A G T A T C G G T C A A C T G C T G A A C T G A T G C G T C A T A G C C T A G A G T C C G T A 1e-8-2.046e+010.74%0.01%18.6bp (31.3bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.607)
More Information | Similar Motifs Found		motif file (matrix)
13 * A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C 1e-8-1.955e+010.49%0.00%35.7bp (0.0bp)POL006.1_BREu/Jaspar(0.649)
More Information | Similar Motifs Found		motif file (matrix)
14 * A G T C C G T A G T C A A G T C C G T A C T A G A G T C C T A G A G T C G T A C G T C A A G T C A G T C 1e-8-1.860e+010.98%0.05%24.0bp (22.1bp)PB0151.1_Myf6_2/Jaspar(0.618)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C G T A C G T A C G T 1e-7-1.683e+010.86%0.04%23.5bp (36.8bp)PH0040.1_Hmbox1/Jaspar(0.840)
More Information | Similar Motifs Found		motif file (matrix)
16 * A T G C G A T C A G T C C G A T C T G A T C A G C T A G A T C G T G A C T G C A 1e-6-1.510e+0110.91%6.22%26.2bp (26.1bp)PB0086.1_Tcfap2b_1/Jaspar(0.868)
More Information | Similar Motifs Found		motif file (matrix)
17 * A G C T A C G T A G T C G A C T G A C T A G C T A C G T A C G T A G C T A C G T 1e-3-9.102e+007.72%4.71%22.6bp (27.9bp)PB0182.1_Srf_2/Jaspar(0.767)
More Information | Similar Motifs Found		motif file (matrix)
18 * C G A T A G T C C G A T A T G C A C G T A G T C A G C T A G T C A G C T A G T C A G C T A G T C A G C T A G T C G A C T A G T C 1e-2-6.317e+000.37%0.03%16.5bp (21.3bp)PRDM1/MA0508.1/Jaspar(0.596)
More Information | Similar Motifs Found		motif file (matrix)