Information for 4-CCTTGAGGCCGCA (Motif 6)

A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A
Reverse Opposite:
C G A T A T C G A G T C A C T G C T A G G T A C A T G C A C G T A G T C C G T A C G T A A C T G A C T G
p-value:1e-11
log p-value:-2.683e+01
Information Content per bp:1.834
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.6 +/- 17.5bp
Average Position of motif in Background41.6 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAGGCCGCA
TGACCTTGAN------
 A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAGGCCGCA
TGACCTTGAV------
 A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCTTGAGGCCGCA
---TGACTCAGCA
 A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A
A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGAGGCCGCA
GCTGACCTTGAACTN---
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGAGGCCGCA--
NNANTTGACCCCTNNNN
 A C G T A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGAGGCCGCA--
NNCNTGACCCCGCTCT
 A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGAGGCCGCA
NATGACCTTGA-------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------CCTTGAGGCCGCA
NNNNATGACCTTGANTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGAGGCCGCA-
WCATTTTGKCCTCYT
 A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTTGAGGCCGCA--
TGTCGTGACCCCTTAAT
 A C G T A C G T A G T C G T A C A C G T A C G T A C T G C G T A A T C G A C T G A G T C G T A C C T A G A T G C C G T A A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T