Information for 10-CTGAGCGGCGCGC (Motif 13)

A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C
Reverse Opposite:
A T C G A G T C A C T G A G T C A C T G A G T C A G T C A T C G A G T C A C G T A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 35.7bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CTGAGCGGCGCGC-
------GGCGCGCT
 A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGAGCGGCGCGC---
-ATAAAGGCGCGCGAT
 A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C A C G T A C G T A C G T
A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGAGCGGCGCGC---
-ATAAGGGCGCGCGAT
 A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C A C G T A C G T A C G T
A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGAGCGGCGCGC------
---TGGCGCGCGCGCCTGA
 A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCGGCGCGC
CTTGAGTGGCT---
 A C G T A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAGCGGCGCGC
NNGCNCTGCGCGGC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGAGCGGCGCGC
RGKGGGCGGAGC--
 A C G T A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGCGGCGCGC----
NAGANTGGCGGGGNGNA
 A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGAGCGGCGCGC----
-NNNGGGGCGCCCCCNN
 A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCGGCGCGC--
NNTNAGGGGCGGNNNN
 A C G T A G T C A C G T A C T G C G T A A C T G T A G C A C T G A C T G A G T C A C T G A G T C T C A G A T G C A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T