Homer de novo Motif Results (hs_MammaryGland_MCF7_Cancer_FOXA1_SRX747791_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 775
Total background sequences = 46537
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T T G A C G A T C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A 1e-308-7.105e+0257.81%6.68%20.3bp (33.3bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.981)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T A T G C G A T C G A T C G A C T A T G C A G T C G A T C T C A G A T C G 1e-12-2.817e+0124.00%14.31%28.9bp (28.8bp)E2F6/MA0471.1/Jaspar(0.768)
More Information | Similar Motifs Found
motif file (matrix)
3 * C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C 1e-11-2.734e+012.19%0.21%32.8bp (22.8bp)NR4A2/MA0160.1/Jaspar(0.607)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C T G A C G T A C T G C T A G C G A T G T C A A G T C A G T C C G T A A C T G A C G T A G T C C T G A 1e-11-2.704e+010.77%0.01%26.8bp (18.0bp)PKNOX2/MA0783.1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
5 * G C T A A C T G C T A G C A T G C G T A A T C G C A T G A G T C A G T C G C T A C G T A T C G A G C A T 1e-10-2.356e+011.29%0.06%29.5bp (25.9bp)ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer(0.644)
More Information | Similar Motifs Found
motif file (matrix)
6 * A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T 1e-9-2.211e+012.32%0.33%28.3bp (31.2bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.622)
More Information | Similar Motifs Found
motif file (matrix)
7 * A G T C A C G T A G T C A T C G A G T C A C G T A C G T C T A G A C T G C G T A G T C A C T A G C T A G 1e-8-1.982e+010.65%0.01%22.1bp (20.0bp)STAT3/MA0144.2/Jaspar(0.564)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C G T A G C T A T G C A C G T A C T G A G T C G C T A G T C A A C G T A T C G G T C A C G A T A C T G G C A T G T A C 1e-7-1.811e+010.77%0.02%21.1bp (38.6bp)PB0145.1_Mafb_2/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T G C T A G T A C G T A C A C G T A C G T A C G T A G T C A G T C G T A C C G T A A G T C C G T A 1e-6-1.390e+010.65%0.02%27.0bp (28.2bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.663)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G C T A C G T A C G T 1e-5-1.166e+010.90%0.09%32.5bp (33.9bp)PH0108.1_Msx3/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C G T A C T G 1e-4-1.082e+010.65%0.04%21.8bp (23.0bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.723)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G C T A G T C A G C T G A C T G C A T A C G T A C G T C A G T A C G T A C G T A G C T A C G T G A C T 1e-2-6.681e+002.97%1.45%23.5bp (33.6bp)PB0182.1_Srf_2/Jaspar(0.808)
More Information | Similar Motifs Found
motif file (matrix)