Information for 7-YTGTCCAAAVAAT (Motif 6)

A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T
Reverse Opposite:
C G T A A G C T C G A T A C T G A C G T C A G T A C G T C A T G A T C G C G T A G A T C C G T A T C G A
p-value:1e-9
log p-value:-2.211e+01
Information Content per bp:1.702
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif153.6
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets63.7 +/- 28.3bp
Average Position of motif in Background47.7 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----YTGTCCAAAVAAT
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YTGTCCAAAVAAT--
ATTTGCATACAATGG
 A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YTGTCCAAAVAAT-----
-GTTCAAAAAAAAAATTC
 A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---YTGTCCAAAVAAT-
TACATGTGCACATAAAA
 A C G T A C G T A C G T A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YTGTCCAAAVAAT----
-NNTNANAACAATTNNA
 A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YTGTCCAAAVAAT
CCTGTCAA------
 A C G T A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------YTGTCCAAAVAAT
AACTAGCTGTCAATAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:YTGTCCAAAVAAT
-TGTCTAGACG--
 A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:YTGTCCAAAVAAT
------NAACAAT
 A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------YTGTCCAAAVAAT
AATTACCTGTCAATAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T A G C G A T A T G C G T A C G T C A G T C A C G T A T G A C C G T A T C G A G C A T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T A C G T