Information for 7-AAGATCTCTC (Motif 3)

C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C
Reverse Opposite:
C T A G C T G A T A C G C T G A T C A G C G T A A G C T G T A C G C A T G A C T
p-value:1e-11
log p-value:-2.734e+01
Information Content per bp:1.556
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif95.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets51.9 +/- 32.8bp
Average Position of motif in Background52.0 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGATCTCTC
AAGGTCAC--
 C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAGATCTCTC---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGATCTCTC------
-ACCACTCTCGGTCAC
 C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAGATCTCTC------
-NNAATTCTCGNTNAN
 C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGATCTCTC------
-AGTATTCTCGGTTGC
 C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGATCTCTC
TCAAGGTCAN--
 A C G T A C G T C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AAGATCTCTC-
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AAGATCTCTC---
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----AAGATCTCTC--
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AAGATCTCTC
TCAAGGTCAT--
 A C G T A C G T C T G A C G T A C A T G T C G A G C A T A G T C G A C T A T G C G A C T G A T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T