Homer de novo Motif Results (hs_Leukemia_K562_Cancer_PBX2_SRX2423703_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 739
Total background sequences = 47311
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T G A C G A T C T A G C G T A C A G T C G A T C G A T C G T A C G A T C A T G C A T G A G T C G A C T 1e-103-2.387e+0220.30%1.87%21.7bp (31.4bp)Hoxa9/MA0594.1/Jaspar(0.948)
More Information | Similar Motifs Found
motif file (matrix)
2 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G 1e-35-8.085e+017.58%0.79%22.3bp (31.1bp)Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer(0.948)
More Information | Similar Motifs Found
motif file (matrix)
3 G A C T G A T C G C T A A G C T A G T C C G A T A T C G C A G T G A T C G C T A C A T G G A T C G T C A 1e-24-5.600e+019.47%2.10%23.9bp (31.1bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.768)
More Information | Similar Motifs Found
motif file (matrix)
4 A C G T T G A C G T C A C G T A C G A T A G T C C G T A C A G T A C G T A T C G A G T C C G T A A C G T C T A G G A C T A G C T 1e-21-5.030e+011.22%0.00%24.9bp (34.9bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.642)
More Information | Similar Motifs Found
motif file (matrix)
5 C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A 1e-19-4.426e+015.01%0.70%26.8bp (32.8bp)POL002.1_INR/Jaspar(0.681)
More Information | Similar Motifs Found
motif file (matrix)
6 C A T G C G T A A C T G C G T A A C G T C G T A C G T A C T A G T A C G T C G A 1e-18-4.331e+015.82%1.01%27.8bp (29.8bp)Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer(0.967)
More Information | Similar Motifs Found
motif file (matrix)
7 A G T C C G A T G T A C A G C T G A C T C G A T T A C G C G A T G T A C C G T A G T C A A C G T A C T G A G C T T A G C C G A T 1e-18-4.174e+011.76%0.03%26.0bp (12.4bp)PB0028.1_Hbp1_1/Jaspar(0.524)
More Information | Similar Motifs Found
motif file (matrix)
8 A C G T T A C G G T C A A T G C A G T C A T G C C G A T A C T G A C T G A G T C C G T A C T A G C G T A A C G T C G A T T A G C 1e-16-3.840e+011.08%0.01%24.0bp (18.6bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.658)
More Information | Similar Motifs Found
motif file (matrix)
9 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G 1e-14-3.288e+011.08%0.01%14.1bp (16.9bp)PB0166.1_Sox12_2/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
10 C G A T A T C G A C G T A T G C C G T A A C G T G A T C C G A T G A C T G A T C T A G C G A C T C T A G C G T A A G T C G A C T 1e-14-3.247e+012.03%0.11%23.6bp (33.1bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
11 T C G A C G T A A T C G C T G A A G C T G T A C C G T A C G T A T C A G G C A T T A G C C G T A A C T G 1e-13-3.189e+013.65%0.53%27.6bp (27.6bp)Tcf7/MA0769.1/Jaspar(0.683)
More Information | Similar Motifs Found
motif file (matrix)
12 C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T 1e-13-3.157e+010.81%0.00%13.5bp (0.0bp)Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer(0.547)
More Information | Similar Motifs Found
motif file (matrix)
13 T G A C A G T C C G T A A T G C G C T A C G T A C T A G C T A G A C G T A C T G A C T G G T A C T C A G 1e-12-2.960e+013.38%0.49%22.8bp (26.7bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.831)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G G T C A C G T A C T A G A G C T C G T A A G C T A C G T A G C T A C T G A C T G C A T G A C T G C G T A A G T C C G T A 1e-11-2.742e+010.81%0.01%24.5bp (10.7bp)PB0160.1_Rfxdc2_2/Jaspar(0.563)
More Information | Similar Motifs Found
motif file (matrix)
15 * G C T A C G A T A G T C A C G T A G T C G T A C A G T C G C T A A G T C C G T A A G T C C G T A C T A G 1e-11-2.647e+010.95%0.01%30.5bp (26.3bp)Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer(0.695)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A 1e-11-2.566e+011.49%0.07%24.9bp (26.4bp)HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer(0.704)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A 1e-11-2.561e+010.68%0.00%31.8bp (11.7bp)Foxq1/MA0040.1/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A T G C A C G T A G T C C G T A A C T G C T A G C T A G C T A G A C G T A C G T A C T G C G T A 1e-11-2.561e+010.68%0.00%32.0bp (0.0bp)Mafb/MA0117.2/Jaspar(0.562)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A C G T A C T G A A C G T C G A T C G T A A T C G C G T A C G T A A C G T C G A T G T A C A C G T A C G T C G A T 1e-11-2.561e+010.68%0.00%24.0bp (0.0bp)PH0089.1_Isx/Jaspar(0.541)
More Information | Similar Motifs Found
motif file (matrix)
20 * G T C A C G T A A T G C A C G T A C T G A C G T A C G T C G A T A T C G G T A C A C G T A C T G C G T A 1e-10-2.500e+010.81%0.01%27.2bp (1.3bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
21 * C T A G C G T A C G A T G T A C C G A T A C G T A G T C G T A C C G A T A C T G C G T A C T G A C G A T 1e-10-2.489e+011.08%0.02%31.7bp (32.1bp)HSF2/MA0770.1/Jaspar(0.661)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C 1e-10-2.420e+011.08%0.03%19.6bp (26.4bp)SA0001.1_at_AC_acceptor/Jaspar(0.566)
More Information | Similar Motifs Found
motif file (matrix)
23 * T A C G A C G T A C G T C T A G A G T C A G C T T G C A C G A T A C T G A T C G 1e-10-2.384e+016.09%1.95%30.3bp (28.7bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.902)
More Information | Similar Motifs Found
motif file (matrix)
24 * A T C G G T A C A G T C C G T A C G T A C T A G A C G T C G T A G T C A C G T A A C T G A T G C C G A T A T C G C G T A A T G C 1e-10-2.329e+010.81%0.01%21.5bp (14.2bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.672)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C C G T A A T C G G T C A C T A G A C G T C T A G C G T A C A T G T A C G C G T A C T G A C G T A A T C G C T A G A C T G 1e-9-2.300e+011.08%0.03%27.2bp (20.2bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.559)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A G T C A T G C C G T A C G T A C G T A A C G T T A G C A G T C C G T A G T C A C G T A G A T C 1e-9-2.241e+010.95%0.02%26.1bp (29.2bp)FOXH1/MA0479.1/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C T G C G A T A T G C G C T A G A C T A T G C A G T C C G A T A T C G A G C T A G T C C G A T A T G C G A T C A G T C G C T A 1e-9-2.090e+013.11%0.63%26.3bp (28.3bp)PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer(0.565)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C G T A C T G A T C G C G T A A T C G C G T A C G A T A G T C C G T A C G T A C G T A C A G T A G T C A T G C A G C T A G T C 1e-8-1.892e+010.95%0.03%28.4bp (23.9bp)Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer(0.697)
More Information | Similar Motifs Found
motif file (matrix)
29 * C T A G A T C G A C G T A C T G A C G T C G T A A G C T A G T C G T C A A C G T 1e-7-1.797e+011.35%0.11%27.5bp (24.7bp)DMRT3/MA0610.1/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
30 * G T C A C A T G A T C G C G T A C T A G C G A T T G A C G T C A A G T C A G C T A G T C T A G C A C G T A C T G C G A T A C T G 1e-7-1.732e+010.95%0.04%25.9bp (35.4bp)PB0203.1_Zfp691_2/Jaspar(0.725)
More Information | Similar Motifs Found
motif file (matrix)
31 * A G T C C G T A A C T G A C G T A C T G G T C A G T A C A C G T A C G T A G T C G T C A A G T C G T C A 1e-7-1.708e+010.54%0.01%28.7bp (26.2bp)ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer(0.673)
More Information | Similar Motifs Found
motif file (matrix)
32 * C G T A A C G T A C T G C G T A G T A C A C T G A C G T A C G T A T C G A G T C C G T A C T A G A G T C 1e-7-1.708e+010.54%0.01%29.1bp (11.9bp)CREB3/MA0638.1/Jaspar(0.725)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G A C T G A C T G A C T G C G T A C G T A C T A G A C T G T C G A A C G T A C T G C G T A C T A G 1e-6-1.548e+010.95%0.05%26.1bp (19.5bp)MZF1/MA0056.1/Jaspar(0.658)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C G T A G T C A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T 1e-6-1.433e+010.54%0.01%6.6bp (23.8bp)CREB3/MA0638.1/Jaspar(0.698)
More Information | Similar Motifs Found
motif file (matrix)
35 * A G T C C G T A G C T A C G T A A C G T A T G C C G T A A C T G A G T C A C G T A C T G C G T A C G A T 1e-6-1.427e+010.95%0.06%22.9bp (34.6bp)TFAP4/MA0691.1/Jaspar(0.854)
More Information | Similar Motifs Found
motif file (matrix)
36 * A C T G A C T G T G A C C G T A A G T C G C T A G C T A A G C T A C G T A C G T G C T A C G A T T A G C 1e-5-1.375e+012.57%0.67%24.4bp (30.5bp)PB0175.1_Sox4_2/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
37 * C T G A C T G A T C G A T G C A T G C A T G C A T G C A T G C A G T C A G T C A T G C A T C G A T C G A T G C A T C G A T G C A 1e-5-1.373e+013.65%1.24%26.0bp (26.2bp)PB0182.1_Srf_2/Jaspar(0.786)
More Information | Similar Motifs Found
motif file (matrix)
38 * T G A C A C G T A T G C G C A T C A T G T A C G A G C T G T A C C T A G A T C G G A T C C G A T A T C G 1e-5-1.222e+010.41%0.00%8.3bp (8.3bp)POL010.1_DCE_S_III/Jaspar(0.623)
More Information | Similar Motifs Found
motif file (matrix)
39 * G T A C T C A G G T A C A G C T G C A T G C T A T G C A G C A T A C G T A T C G 1e-3-9.012e+002.17%0.72%35.2bp (32.8bp)Hmx1/MA0896.1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)