Information for 5-GMCTCAGCCTTCA (Motif 5)

C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
Reverse Opposite:
C G A T A T C G G T C A G C T A C T A G T C A G G T A C A C G T A C T G C G T A A C T G A C G T G A T C
p-value:1e-19
log p-value:-4.426e+01
Information Content per bp:1.672
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif331.8
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets54.4 +/- 26.8bp
Average Position of motif in Background50.4 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GMCTCAGCCTTCA
---TCAGTCTT--
 C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GMCTCAGCCTTCA
TGACTCAGCA----
 A C G T C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GMCTCAGCCTTCA
TGAGTCAGCA----
 A C G T C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GMCTCAGCCTTCA-
--GYCATCMATCAT
 C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A A C G T
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GMCTCAGCCTTCA
ATGACTCATC-----
 A C G T A C G T C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GMCTCAGCCTTCA
CTGAGTCAGCAATTT
 A C G T A C G T C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GMCTCAGCCTTCA
-NGTCAGCANTTT
 C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GMCTCAGCCTTCA--
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GMCTCAGCCTTCA
ATGACTCAGCAD---
 A C G T A C G T C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T A C G T

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GMCTCAGCCTTCA
NATGACTCATNN----
 A C G T A C G T A C G T C T A G T G C A T G A C A C G T G T A C C G T A A C T G A G T C G A T C C G A T A C G T T A G C C G T A
C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C A C G T A C G T A C G T A C G T