Information for 15-CTKCGCCAAAAAC (Motif 22)

A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A G C T C G A T T A C G A C T G A G T C C A T G G T A C C G T A A C T G
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.788
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.1 +/- 19.6bp
Average Position of motif in Background59.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTKCGCCAAAAAC----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTKCGCCAAAAAC----
GTTAAAAAAAAAAATTA
 A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTKCGCCAAAAAC----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTKCGCCAAAAAC---
GTTCAAAAAAAAAATTC
 A C G T A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

POL007.1_BREd/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CTKCGCCAAAAAC
------NANANAC
 A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CTKCGCCAAAAAC
CATTTCCTGAGAAAT
 A C G T A C G T A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTKCGCCAAAAAC--
-TACTGGAAAAAAAA
 A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C A C G T A C G T
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTKCGCCAAAAAC
-TTCCKNAGAA--
 A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C
A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTKCGCCAAAAAC----
--ATGCTAAAAATAGAA
 A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CTKCGCCAAAAAC----
------AATAAACAATN
 A G T C A C G T A C G T G A T C C T A G G T A C A G T C C G T A C T G A C G T A C G T A G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A