Information for 13-CAATGATGGATWTAAA (Motif 16)

G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
Reverse Opposite:
C G A T G A C T G A C T C G T A C G T A C T G A A C G T A G T C A T G C G C T A A C G T A G T C G C T A A G C T A G C T C A T G
p-value:1e-11
log p-value:-2.566e+01
Information Content per bp:1.683
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif32.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets41.8 +/- 24.9bp
Average Position of motif in Background57.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAATGATGGATWTAAA
--ATGATKGATGRC--
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAATGATGGATWTAAA
-TTTGATTGATGN---
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAATGATGGATWTAAA
NNNNNATTGATGNGTGN---
 A C G T A C G T A C G T A C G T G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAATGATGGATWTAAA
--ATGATGCAAT----
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAATGATGGATWTAAA
--MTGATGCAAT----
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAATGATGGATWTAAA
---TGATTAAATTA--
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAATGATGGATWTAAA
NNANTGATTGATNTTN-
 A C G T G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAATGATGGATWTAAA
---TGATTGATGA---
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAATGATGGATWTAAA
-NWTGATTRGRTTAWN
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAATGATGGATWTAAA
--ATGATCGAATCAAA
 G T A C T C G A C T G A C G A T A C T G C G T A C G A T A T C G C T A G G T C A A G C T G C A T C G A T C T G A C T G A C G T A
A C G T A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A