Homer de novo Motif Results (hs_EmbryonicStemCell_hESC_normal_HEB_SRX019200_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 831
Total background sequences = 47740
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G A T G C G A T C T C G A A T G C G A T C C G T A C A T G C T A G C A G T C T A G C A T G G T A C T C A G T A G C A G C T 1e-105-2.426e+0213.72%0.69%20.0bp (31.2bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.967)
More Information | Similar Motifs Found
motif file (matrix)
2 T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T 1e-59-1.374e+0237.79%14.65%24.4bp (30.5bp)HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer(0.975)
More Information | Similar Motifs Found
motif file (matrix)
3 A T G C A T G C G A T C C T A G A T C G G C A T A T C G C G A T A G C T G A C T T G C A A G T C G C A T A G T C A G T C A G T C 1e-16-3.692e+010.84%0.00%22.1bp (8.1bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.578)
More Information | Similar Motifs Found
motif file (matrix)
4 C A G T A C T G T A G C G A C T A C T G A T G C A G T C A G T C A C G T A T G C A G C T T C G A T A C G 1e-15-3.569e+012.29%0.16%22.3bp (27.6bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.609)
More Information | Similar Motifs Found
motif file (matrix)
5 C A G T A C T G G T A C G T C A C G A T C A G T C G A T A T C G C G T A T C G A C G A T T A C G T C A G 1e-12-2.926e+010.84%0.01%15.3bp (11.3bp)Pou5f1::Sox2/MA0142.1/Jaspar(0.729)
More Information | Similar Motifs Found
motif file (matrix)
6 A G T C C G T A A T C G A T G C G T C A A G T C A G T C T G C A A G C T A C T G A C T G G T C A A G T C G T C A C T A G T A G C 1e-12-2.926e+010.84%0.01%6.9bp (8.9bp)REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer(0.878)
More Information | Similar Motifs Found
motif file (matrix)
7 A C T G C T A G C T A G A C T G A T C G C G T A A C T G C T A G A C T G A T C G G T C A C T G A A C T G A C T G A C T G C T G A 1e-12-2.819e+011.20%0.03%24.7bp (24.6bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.700)
More Information | Similar Motifs Found
motif file (matrix)
8 * T C G A G T A C A C G T A G C T G A T C G T A C A G T C A C G T A G T C A C G T A G T C A G T C A G T C 1e-11-2.577e+011.08%0.03%25.7bp (28.0bp)RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer(0.626)
More Information | Similar Motifs Found
motif file (matrix)
9 * A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C 1e-10-2.507e+010.60%0.00%26.6bp (6.8bp)PB0071.1_Sox4_1/Jaspar(0.783)
More Information | Similar Motifs Found
motif file (matrix)
10 * T G A C A G T C G T C A A C T G A G T C C T A G G T A C A G T C G A T C A G C T A T G C A C G T T C G A 1e-9-2.245e+011.20%0.06%28.5bp (29.2bp)ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer(0.611)
More Information | Similar Motifs Found
motif file (matrix)
11 * G C A T G A C T A C G T A C T G A C G T T C A G C A G T A C G T A C G T G C A T 1e-9-2.177e+012.29%0.36%27.4bp (30.1bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.744)
More Information | Similar Motifs Found
motif file (matrix)
12 * T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G 1e-9-2.169e+013.73%0.96%27.3bp (30.2bp)TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.812)
More Information | Similar Motifs Found
motif file (matrix)
13 * G T A C C G T A C T A G A C T G A C T G C G T A A C G T A C T G A G T C A G C T A C G T A C G T A G T C 1e-9-2.162e+010.60%0.01%19.7bp (7.0bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.604)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C G T C A A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C T G A T G C A G C T A G T C 1e-8-2.024e+010.72%0.01%26.3bp (30.5bp)POL006.1_BREu/Jaspar(0.722)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A G T C A G T C A G T C A C T G A G T C A T C G C T G A A G T C A C G T A T C G A C T G A C T G 1e-8-1.940e+010.48%0.00%22.2bp (3.3bp)E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer(0.688)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A G T C A C G T A C T G A G T C A G T C A T G C A C G T C T A G A G C T A T C G A G C T A C T G A G T C C G T A A T C G 1e-8-1.940e+010.48%0.00%24.1bp (0.0bp)PB0104.1_Zscan4_1/Jaspar(0.582)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C A G C T A G T C G T A C A G T C G T C A A T G C A T G C G T A C A T C G A T C G G T C A A T G C 1e-8-1.868e+011.81%0.26%27.5bp (25.1bp)PB0205.1_Zic1_2/Jaspar(0.648)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A 1e-7-1.708e+010.60%0.01%13.5bp (11.8bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.648)
More Information | Similar Motifs Found
motif file (matrix)
19 * G A T C G T A C G T C A G T A C C T A G C G A T C T G A G T C A A G C T G C A T 1e-6-1.413e+012.05%0.47%27.8bp (30.8bp)MLX/MA0663.1/Jaspar(0.737)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A G T C C G T A A C T G A C G T A C T G A C G T C G A T A G T C A C G T A G T C G C T A A C T G 1e-5-1.302e+010.48%0.01%30.9bp (22.5bp)PB0062.1_Sox12_1/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)